Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2501 ATGGATAGCATAATGAACAAGCTTCGAAATCTCGATGCATATCCGAAAATCAACGAAGATTTCTATAGTCGCACTCTTTCTGGCGGTGTTATCACTCTCGCTTCTTCCATTCTCATGCTCTTGCTTTTCTTCTCCGAGCTTCGGTTGTATCTTCATGCTGCAACTGAAACTAAGCTTGTTGTAGATACTTCTAGAGGCGAAACTCTTCGTATTAATTTTGATGTTACATTTCCTGCACTAGCGTGTTCTATACTTAGTCTCGATGCCATGGACATTAGCGGAGAACAGCATCTGGATGTAAGACATGATATAATCAAGAAAAGAATAGACTCGCATGGCAATGTGATAGAAACAAGGCAAGATGGAATTGGTTCTCCCAACATTGAAAAACCCTTGCAAAGACATGGAGGCAGGCTTGAGCACAATGAGACTTATTGTGGATCCTGTTATGGTGCTGAGTCGTCAGATGAGGAATGTTGTAATTCATGCGAGGAAGTTCGTGAAGCATATCGAAAGAAAGGTTGGGCACTCTCAAGCCCGGACTCAATTGACCAGTGCAAAAGAGAAGGGTTCTTAGAAAGAATCAAGGAAGAAGAAGGTGAAGGATGCAATGTGTATGGCTTTTTGGAAGTAAACAAGGTGGCAGGGAATTTCCATTTTGCTCCTGGGAAAAGCTTTCAGCAATCTGGCGTACATGTGCATGACCTGCTGGCTTTTCAAAAGGAGTCATTTAATTTAAGTCACCACATCAACAGAATAGCCTTTGGAGACTATTTTCCTGGTGTCGTAAACCCTCTTGACCGTGTGCATTGGACACAAGAATCACCAACTGGGATGTACCAGTATTTTATTAAGGTTGTGCCAACTATGTACACTGACGTGAGTGGGAACACTATCCAGTCAAACCAGTTCTCTGTGACAGAACACTTTAGGACGGGAGATGTAGGCCGATTGCAGTCCCTCCCTGGAGTCTTTTTCTTCTATGACCTTTCTCCGATTAAGGTTACTTTTACAGAAGAACATGTCTCATTCTTACATTTTCTTACCAATGTATGCGCCATAGTTGGAGGTATTTTCACTGTTTCTGGAATACTAGATTCATTTATCTATCATGGCCAAAAGGCTATCAAGAAGAAGATGGAACTCGGCAAATTTAGCTGA 1161 0.4195 MDSIMNKLRNLDAYPKINEDFYSRTLSGGVITLASSILMLLLFFSELRLYLHAATETKLVVDTSRGETLRINFDVTFPALACSILSLDAMDISGEQHLDVRHDIIKKRIDSHGNVIETRQDGIGSPNIEKPLQRHGGRLEHNETYCGSCYGAESSDEECCNSCEEVREAYRKKGWALSSPDSIDQCKREGFLERIKEEEGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQKESFNLSHHINRIAFGDYFPGVVNPLDRVHWTQESPTGMYQYFIKVVPTMYTDVSGNTIQSNQFSVTEHFRTGDVGRLQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGIFTVSGILDSFIYHGQKAIKKKMELGKFS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2501 386 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 8 97 IPR039542 -
Mal8g2501 386 Pfam Endoplasmic reticulum vesicle transporter 149 366 IPR012936 -
Mal8g2501 386 PANTHER ENDOPLASMIC RETICULUM VESICLE TRANSPORTER PROTEIN 2 385 - -
Mal8g2501 386 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 2 385 IPR045888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2501 Mal-Chr8 56513384 56523331 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2501 K20367 - gmx:100782309 729.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2501 8 56513384 56523331 Mal8g2501 8 56513384 56523331 ECH