Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2354 ATGAGAAGATTCACGTTGTTAACGCCGTATCGGCGCCATTTTCTTTCATCATTTGCATCGCAATCTCACCTTGATAAAATCGATTCGTTTGGAAAATTCTTCTCCTCTCATCAGTCGTTGTTGCTTTCACGAAGTTTGTTCGGTTGCAGTTTTGACACGAAAAGGGATGAGTCTATAATTCCGAGAATTCCATTCAGATTTCGTTATGTTTATGCTACAGCAGCATATTCTTCTTCAGCTGAACGAAACTATTATCGGATACTTGGTGTTGCTGAAAATGCTAGTCAGGATGAGATAAAGAAGGCATTTCACTCGCTTGCTAAAAAGTACCATCCAGACGCAAATAAGAATAATCCATCGGCAAAGAGGAAATTTCAAGATATAAGAGAAGCTTATGAGACATTGAGAGACTCTAAAAAGAGGGCAGATTATGACAAGATGCGTGCTCACGGTTCAGAGAATATGGAATATGGTAACAATCACGATGATGCAGAAAGATTTAGAAATGCCTATCGTTCTCATTTTTCTGATTCATTTCATAAAGTATTCTCTGAGATATTTGAAGAAGCAACAACTCAGTTCTCGTCAAATATAGAGGTGGAGTTATCACTTACTTTCTCAGAAGCCGCGGGAGGATGCACCAAAAACGTGTCATTTGATGCGGCAGTTCCCTGTGATTCTTGCGATGGACGGGGATATCCACAAAATGCTACCCCAACAGTTTGTTCAACATGCAGGGGCGCAGGCCGAGTTACAATCCCGCCATTTACATCAACATGCATTACTTGTAAAGGATCTGGCCGCATTATTAAGGAGTTTTGTTTGTCGTGTGGAGGCTCTGGGGTAATTGAAGGGATTAAAGAGGTTAAAGTTACCATACCAGCAGGTGTGGATTCAGGAGATACAATCCATGTGCCAGAAGGTGGGAATGCTGCTGGAAGTGGTGGTCGACATGGAAGTTTATACATTAAAATAAAGGTGGCTGAGGATCCAGTCTTTGTGAGGGATGGTGCAGATATCTATGTAGACTCCAATATTAGCTTTACACAGGCTATTCTTGGTGGCAAAGTTGAGGTGCCTACTTTATCAGGGAAGATGCAAGTTAAGATACCTAAGGGTGTTCAACCAGGACAGCTGCAAGTATTTAGAGGCAAAGGACTGCCAAAGCATGGGTATTTTGTACATCATGGCGATCAGTATGTGCGTTTCCGTGTAAACTTTCCCACTGCAATCAATGAACGACAACGTGCTATACTTGAAGAATTTGCAAAGGAGGAAATAAAGGAGGGAAATAGTTCAATATCTGAAGGAAATTGGTGGCAGCAAATTATTGAATACACGACGGCTCCAAAGTCTGTGCTGGAATTATCTATGCTGATATTATTCCTTGTCTTGATTAACAAAATGTTGAGCTGA 1416 0.4117 MRRFTLLTPYRRHFLSSFASQSHLDKIDSFGKFFSSHQSLLLSRSLFGCSFDTKRDESIIPRIPFRFRYVYATAAYSSSAERNYYRILGVAENASQDEIKKAFHSLAKKYHPDANKNNPSAKRKFQDIREAYETLRDSKKRADYDKMRAHGSENMEYGNNHDDAERFRNAYRSHFSDSFHKVFSEIFEEATTQFSSNIEVELSLTFSEAAGGCTKNVSFDAAVPCDSCDGRGYPQNATPTVCSTCRGAGRVTIPPFTSTCITCKGSGRIIKEFCLSCGGSGVIEGIKEVKVTIPAGVDSGDTIHVPEGGNAAGSGGRHGSLYIKIKVAEDPVFVRDGADIYVDSNISFTQAILGGKVEVPTLSGKMQVKIPKGVQPGQLQVFRGKGLPKHGYFVHHGDQYVRFRVNFPTAINERQRAILEEFAKEEIKEGNSSISEGNWWQQIIEYTTAPKSVLELSMLILFLVLINKMLS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2354 471 Pfam DnaJ C terminal domain 198 408 IPR002939 -
Mal8g2354 471 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 33 449 - -
Mal8g2354 471 ProSiteProfiles Zinc finger CR-type profile. 212 286 IPR001305 GO:0031072|GO:0051082
Mal8g2354 471 SUPERFAMILY Chaperone J-domain 79 172 IPR036869 -
Mal8g2354 471 Pfam DnaJ domain 83 145 IPR001623 -
Mal8g2354 471 Gene3D - 328 438 - -
Mal8g2354 471 SUPERFAMILY HSP40/DnaJ peptide-binding domain 332 419 IPR008971 GO:0006457|GO:0051082
Mal8g2354 471 ProSitePatterns Nt-dnaJ domain signature. 125 144 IPR018253 -
Mal8g2354 471 Hamap Chaperone protein DnaJ [dnaJ]. 80 446 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mal8g2354 471 SUPERFAMILY HSP40/DnaJ peptide-binding domain 197 328 IPR008971 GO:0006457|GO:0051082
Mal8g2354 471 Pfam DnaJ central domain 225 281 IPR001305 GO:0031072|GO:0051082
Mal8g2354 471 PANTHER CHAPERONE PROTEIN DNAJ 1, MITOCHONDRIAL 33 449 - -
Mal8g2354 471 Gene3D - 220 254 - -
Mal8g2354 471 Gene3D - 255 288 - -
Mal8g2354 471 SMART dnaj_3 82 140 IPR001623 -
Mal8g2354 471 Gene3D DnaJ domain 79 195 IPR036869 -
Mal8g2354 471 PRINTS DnaJ domain signature 103 118 IPR001623 -
Mal8g2354 471 PRINTS DnaJ domain signature 140 159 IPR001623 -
Mal8g2354 471 PRINTS DnaJ domain signature 85 103 IPR001623 -
Mal8g2354 471 PRINTS DnaJ domain signature 120 140 IPR001623 -
Mal8g2354 471 CDD DnaJ_C 196 409 - -
Mal8g2354 471 Gene3D - 196 326 - -
Mal8g2354 471 CDD DnaJ 83 137 IPR001623 -
Mal8g2354 471 CDD DnaJ_zf 225 281 IPR001305 GO:0031072|GO:0051082
Mal8g2354 471 ProSiteProfiles dnaJ domain profile. 83 148 IPR001623 -
Mal8g2354 471 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 212 283 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2354 Mal-Chr8 51469455 51483028 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2354 83 180 Miscellaneous Gene Families AT1G16680 32.353 2.81e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2354 - - gmx:100809440 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2354 8 51469455 51483028 Mal8g2354 8 51469455 51483028 ECH