LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal8g2281	ATGGCTTCAATCTCAAGCATTTATTCATCTTCACCAACACTAAACCATCAAAAAAACCAAAACGCATCATCTATTCCAATACGACGTCGTTCACAACATCTCCCTATATACCAAACCCAACCCAAACTTCCTCTAACCCGCTCCGTCGCACGCGAGGTTCCAACCGACCTCACCACCGCCGTGCAATCCACAAACCACCACCGTCTCGAGAAGGATCCACGCGCGCTATGGCGGCGTTACGTGGACTGGCTATACCAGCACAAGGAAATTGGTTTGTATCTGGATGTGAGCCGGGTCGGGTTTACCGATGAATTTGTGAAGGAAATGGAGCCGAGGTTTGAGGCGGCGTTTAAGGCTATGGAGGAGCTTGAAAAAGGAGCGATTGCCAATCCTGATGAAGGGCGTATGGTTGGACATTATTGGCTTAGAGATTCGAATCGTGCTCCAAATCCGTTTCTTAAGACGCAGATTGATAAGACTCTTGATGCTATCTGTGGTTTCGCCGATGATATCGTCTCCGGTAAGATTAAGCCTCCTTCTTCGCCTGAGGGAAGGTTTACTCAGATACTTTCTGTTGGGATTGGAGGTTCTGCACTTGGACCACAGTTTGTTGCAGAGGCACTTGCTCCTGATAATCCTCCACTCAAGATAAGATTTATTGACAACACAGATCCTGCTGGCATTGATCATCAGATTGCACAACTTGGCCCTGAGCTAGCTTCGACACTTGTAATCGTCATTTCAAAGAGTGGAGGCACCCCTGAGACTAGAAATGGCTTGTTAGAAGTACAAAAGGCCTTTCGTGAAGCAGGATTGGATTTCCCAAAACAGGGTGTTGCTATAACACAAGAAAATTCTTTGTTGGATAATACTGCCAGAATTGAGGGATGGTTAGCTAGATTTCCCATGTTTGACTGGGTGGGAGGTAGAACATCAGAGATGTCTGCAGTCGGCCTGCTTCCAGCAGCTCTGCAGACCATTGACATTAGAGAAATGCTTCTTGGTGCATCACTCATGGATGAGGCAAATAGGAATACTGTGATAAAGAATAATCCTGCAGCTTTACTAGCTTTATCTTGGTATTGGGCTACAGATGGTGTAGGGTCCAAGGATATGGTTATCCTTCCGTATAAGGACAGTCTGTTATTATTTAGTAGATACTTGCAGCAATTGGTCATGGAATCTCTGGGCAAAGAATATGACTTGGATGGTAATCGGGTTAATCAAGGAATTAGTGTCTACGGAAATAAAGGAAGCACAGATCAGCATGCCTACATTCAGCAACTGAGGGAAGGTGTGCACAATTTCTTTGCGACATTCATTGAGGTGCTACGCGATAGACCACCGGGTCATGATTGGGAGCTTGAACCAGGTGTTACATGTGGTGACTACCTGTTTGGTATGCTCCAGGGAACGAGGTCAGCTTTGTATTCTAATGACCGAGAGTCCATCACAGTCACTGTGCAAGAAGTAACACCTCGATCAGTTGGAGCCCTAGTTGCACTGTATGAACGAGCAGTTGGGATATATGCATCACTTGTCAACATAAATGCTTATCACCAGCCTGGTGTGGAAGCTGGTAAGAAAGCAGCAGGAGAAGTATTAGCACTTCAAAAACGGGTGCTGGCAGTGCTAAACGAGGCAAGCTGCAAGGAACCTGTTGAACCATTGACAATTGAAGAAGTAGCTGACCGGTGCCACGCTCCAGAAGATATTGAAGTAATTTACAAGATTATTGCTCATATGGCTGCCAACGACAGAGCACTAATTGCTGAAGGTAACTGTGGTTCTCCAAGGAGCGTCAAAGTTTTTCTCGGAGAGTGTAATGTTGATGAACTGTATGCGTGA	1848	0.4578	MASISSIYSSSPTLNHQKNQNASSIPIRRRSQHLPIYQTQPKLPLTRSVAREVPTDLTTAVQSTNHHRLEKDPRALWRRYVDWLYQHKEIGLYLDVSRVGFTDEFVKEMEPRFEAAFKAMEELEKGAIANPDEGRMVGHYWLRDSNRAPNPFLKTQIDKTLDAICGFADDIVSGKIKPPSSPEGRFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVIVISKSGGTPETRNGLLEVQKAFREAGLDFPKQGVAITQENSLLDNTARIEGWLARFPMFDWVGGRTSEMSAVGLLPAALQTIDIREMLLGASLMDEANRNTVIKNNPAALLALSWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEYDLDGNRVNQGISVYGNKGSTDQHAYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYSNDRESITVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTIEEVADRCHAPEDIEVIYKIIAHMAANDRALIAEGNCGSPRSVKVFLGECNVDELYA*	616

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal8g2281	615	SUPERFAMILY	SIS domain	61	538	IPR046348	GO:0097367\|GO:1901135
	Mal8g2281	615	ProSitePatterns	Phosphoglucose isomerase signature 2.	511	528	IPR018189	GO:0004347\|GO:0006094\|GO:0006096
	Mal8g2281	615	Gene3D	-	175	320	-	-
	Mal8g2281	615	Gene3D	-	321	520	-	-
	Mal8g2281	615	Hamap	Glucose-6-phosphate isomerase [pgi].	89	538	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Mal8g2281	615	PRINTS	Glucose-6-phosphate isomerase signature	377	398	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Mal8g2281	615	PRINTS	Glucose-6-phosphate isomerase signature	511	524	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Mal8g2281	615	PRINTS	Glucose-6-phosphate isomerase signature	189	208	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Mal8g2281	615	PRINTS	Glucose-6-phosphate isomerase signature	497	511	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Mal8g2281	615	PRINTS	Glucose-6-phosphate isomerase signature	479	497	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Mal8g2281	615	PRINTS	Glucose-6-phosphate isomerase signature	301	319	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Mal8g2281	615	CDD	SIS_PGI_2	370	534	IPR035482	-
	Mal8g2281	615	PANTHER	GLUCOSE-6-PHOSPHATE ISOMERASE	1	615	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Mal8g2281	615	ProSiteProfiles	Glucose-6-phosphate isomerase family profile.	69	544	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Mal8g2281	615	Pfam	Phosphoglucose isomerase	476	536	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Mal8g2281	615	Pfam	Phosphoglucose isomerase	118	445	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Mal8g2281	615	PANTHER	GLUCOSE-6-PHOSPHATE ISOMERASE	1	615	-	-
	Mal8g2281	615	MobiDBLite	consensus disorder prediction	1	29	-	-
	Mal8g2281	615	CDD	SIS_PGI_1	158	324	IPR035476	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal8g2281	Mal-Chr8	49125077	49135128	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal8g2281	K01810		-	gmx:100809452	1066.22

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal8g2281	8	49125077	49135128	Mal8g2281	8	49125077	49135128	ECH