Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2275 ATGAATTACATTAGTGGTGATTTGGCTCAGGGATTTAGTGAAGCTTCTCTTTCCTCTCCTAATACTAAGCTTCAGTCTGCATCGTCAGTTCAACTTGCTTCTCATAGTAGGAACGGTAATAAGGTTTTCAAGAGTGGGACGCTTTTCATAGCTTCCAAAGGAATTGGCGGGTGGACATCCTGGAAGAAAAGATGGTTTATTTTAACACAAACTTCACTTGTTTTCTTCAGAAGTGATCCAAATGCTGTTGCTCAGAAGGGAAGTGAAGTTAATTTGACCCTTGGTGGCATTGACCTCGACAATTCAGGCAGTGTTTCTGTCAAAACAGACAAGAAAATTTTGACTGTAGAATTTCCTGATGTTCGTGATAGACGAGTACACACATTTAAGGCGGAAACTACTGAGGATTTATATGAATGGAAAACTGCACTTGAGAATGTTTTGGCACACGCACCAAGTGCTACTAATGTGATGGGGCAAAGTGGTATCTTTAGGAGTTATCAGGCTGATTCACTCGATATTTATTTGGACCAGTTGAAGGATAGAGAAACAGTAAATTATGCAGTCCTTGGCCGGCCAATTTTACTTGCTTTGGAGGAAGTTGATGGAACTCCATCTTTTTTGGAAAAAGCCCTGAGGTTCATAGAAGAGCATGGAGCCAAAGTAGAAGGGATCTTGCGGCAAGCAGCCGATGTTGAAGATGTTGAAAATCGAGTGCGGGAATATGAACAAGGAAAAGTTGAATTTTCTGAGGAGGAGGACGCACATGTTGTTGCTGATTGTGTTAAGCATGTACTTCGTGAATTGCGGTCTTTTCCAGTCCCAGCATCTTGTTGCAAGGCGTTGTTAGAAGCTTGTCGAACTGCACGTGGGAATAGGGTTTCTGCTATGCGTGCAGCAATATGGGACACTTTTCCTGAACCAAACCGCCGTTTATTGCAAAGAATACTCTTGATGATGCAAACAGTAGCTTCCCGAAAAGCTGAAAACAGAATGAGCTCATCGGCTGTGGCAGCATGCATGGCACCATTAATTCTTCGCCCGCTTCTAGTTGGGGATTGTGAGATTGAAAATGATTTTGATGTAGGTGGGGATGGTTCCATTCAACTTCTGCAAGCAGCTGCTGCAGCTAACCATGCTCAAGCAATTGTTATTACATTATTAGAAGAATATAACAGCATATTTGAGGAAGGTTCTTCATCTCCAGGCCCTGATATGTACATGGACTCAGAAGATGATGAATCTGGGAGTGAGGAGGCTACTGATGATGATTTGTCCTATGATGATTATTATGATGATGATGATGAGCAAGATGAATCAATAGAAGGGTCAGATGTAGATCCAGATGATGATCTTATTAGTGAAACCAACAGCGAAACCGGAGACTCTGCAGTCAATGACGGATATAATGATAAGGACCATAATCTTTCATATTCAAGTTCAAAGTCCTCAGAGGTAAGTGACTATCTTGAAGTCGACCAAAGGTTGTCAACAATGTCACTTGAAGTCTCATTGCCTCGGTCCGAAGATATCAAAAGCTGTGAAAATTTTGCAAGCCAAAATAACACTGCTTGTTCACATGAGTTCAACAACCCCAGTGAAAATTTCACAAGCCAAAATAAAACAGCTTCTGCCACTGACTCCGCTAAGCCCACGGATATAACTGAAGGCTTATCCCCTAACCAAACTACAATGAATAGATCAGATTGTCCTAGCTCTTCTTCATGTATGAACAACTCTATAACCATATCCAATGTGCCAATGCAACGGCGCCGCACTGTTTTTGGACGAAACTCTGGAAGCAAGAACATTTCCATGGAATCCATTGATTTTCAAGACGAAAACGAAGCTGAAGTTGAGAGGCTCGAAGCTGTTAAGACAGGATTGCAAAGGCAAATTGCAGAGGAGGTAAAAGTAAATGCAAAGCTGCAATCTTATGTGGAAACACGAAAGGAAGAATTGCACGAGCGTCGTCTGGTTCTTGAGCGAAATGTGGATAAATTACAGGAACAGTTGCTAAAGGAGAAGAGCTTCAGGGCAACTCTTGAAGCAGGACTTGAGTTTCCTCCGGGGACTTCGTCTGAAGTATCTGGTATTGATGAAAAGACCAAGACATATTTTGAGGAATTAGTGCTGATAGAGGCAGATCTTTCCAACTTAGAATGGAAGGTTCATGAGCTTGGTTTACGGCTTAATGCACAACTTGATTGGAATTATGGTTCGATGCAGAATTTCTGCTATCAATCCCAACAGATATCAAGTCATGAAAGAAATTTGAAGAATAAGCCAGATACTGAAGTTGCAGTCATTTCAGAATCTGATGGATCAATAAGAAAGCAGGACACTCATTTTGGTGGAGCAGAAAATGAGAATGAGAGAAAATCAGGGTCAACAACACCTTTACCAAACAAACATTCACCTAGTTCCAAGAAATCTGTTACAAGGGTTGAGGGAGCAAATTCCAGTACTTCTACAATTACAAGACTGACATCCAAACTAAACTTTTTGAAGGATCGCCGTAGTCAGTTTTCAAATGAACTAAGAAACATGAATAAAGGAAAAGCATTTGAACTTCAGCTACCACCTCCATCTCCCAACAAGTCTCTAGGATATGAGTTTGCAACGCCACTTCGATCCCCAAATAAGTCTCGAGGAAATGAACGTCACTCGCCACTTCCATCCCCCAATAAGTCTCGAGGGTTTGAATTTTACATATCTCTTATATCTCCAAATAGGTCTCGAGGATCTGAAAATCATTCTCCATCAACCCCTGAGAAAGTTAGAGGCAATGAAGATCATTCAGTTCGATATTCAGAGAAACTGAGAAAATCAGATAGCCAGCCATATCACTCAGATAGTCAGAATGAATCTTCACAATTATACTTGAAAAGAGGAAGGTCGGAAGGGCGTTATCAGCCTCATAATGTTGACAAAAGTCAATTACTTTAA 2949 0.4113 MNYISGDLAQGFSEASLSSPNTKLQSASSVQLASHSRNGNKVFKSGTLFIASKGIGGWTSWKKRWFILTQTSLVFFRSDPNAVAQKGSEVNLTLGGIDLDNSGSVSVKTDKKILTVEFPDVRDRRVHTFKAETTEDLYEWKTALENVLAHAPSATNVMGQSGIFRSYQADSLDIYLDQLKDRETVNYAVLGRPILLALEEVDGTPSFLEKALRFIEEHGAKVEGILRQAADVEDVENRVREYEQGKVEFSEEEDAHVVADCVKHVLRELRSFPVPASCCKALLEACRTARGNRVSAMRAAIWDTFPEPNRRLLQRILLMMQTVASRKAENRMSSSAVAACMAPLILRPLLVGDCEIENDFDVGGDGSIQLLQAAAAANHAQAIVITLLEEYNSIFEEGSSSPGPDMYMDSEDDESGSEEATDDDLSYDDYYDDDDEQDESIEGSDVDPDDDLISETNSETGDSAVNDGYNDKDHNLSYSSSKSSEVSDYLEVDQRLSTMSLEVSLPRSEDIKSCENFASQNNTACSHEFNNPSENFTSQNKTASATDSAKPTDITEGLSPNQTTMNRSDCPSSSSCMNNSITISNVPMQRRRTVFGRNSGSKNISMESIDFQDENEAEVERLEAVKTGLQRQIAEEVKVNAKLQSYVETRKEELHERRLVLERNVDKLQEQLLKEKSFRATLEAGLEFPPGTSSEVSGIDEKTKTYFEELVLIEADLSNLEWKVHELGLRLNAQLDWNYGSMQNFCYQSQQISSHERNLKNKPDTEVAVISESDGSIRKQDTHFGGAENENERKSGSTTPLPNKHSPSSKKSVTRVEGANSSTSTITRLTSKLNFLKDRRSQFSNELRNMNKGKAFELQLPPPSPNKSLGYEFATPLRSPNKSRGNERHSPLPSPNKSRGFEFYISLISPNRSRGSENHSPSTPEKVRGNEDHSVRYSEKLRKSDSQPYHSDSQNESSQLYLKRGRSEGRYQPHNVDKSQLL* 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2275 982 Coils Coil 612 632 - -
Mal8g2275 982 MobiDBLite consensus disorder prediction 457 487 - -
Mal8g2275 982 SUPERFAMILY PH domain-like 33 149 - -
Mal8g2275 982 MobiDBLite consensus disorder prediction 855 982 - -
Mal8g2275 982 ProSiteProfiles Rho GTPase-activating proteins domain profile. 196 395 IPR000198 GO:0007165
Mal8g2275 982 Gene3D - 29 150 IPR011993 -
Mal8g2275 982 MobiDBLite consensus disorder prediction 407 456 - -
Mal8g2275 982 Pfam RhoGAP domain 205 348 IPR000198 GO:0007165
Mal8g2275 982 SUPERFAMILY GTPase activation domain, GAP 204 397 IPR008936 GO:0007165
Mal8g2275 982 Coils Coil 826 846 - -
Mal8g2275 982 ProSiteProfiles PH domain profile. 41 149 IPR001849 -
Mal8g2275 982 CDD RhoGAP 205 358 - -
Mal8g2275 982 Pfam PH domain 43 148 IPR001849 -
Mal8g2275 982 MobiDBLite consensus disorder prediction 396 487 - -
Mal8g2275 982 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 25 855 - -
Mal8g2275 982 MobiDBLite consensus disorder prediction 770 825 - -
Mal8g2275 982 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 25 855 - -
Mal8g2275 982 MobiDBLite consensus disorder prediction 776 790 - -
Mal8g2275 982 Pfam Leucine-zipper of ternary complex factor MIP1 654 734 IPR025757 -
Mal8g2275 982 Coils Coil 232 252 - -
Mal8g2275 982 MobiDBLite consensus disorder prediction 791 825 - -
Mal8g2275 982 MobiDBLite consensus disorder prediction 525 576 - -
Mal8g2275 982 CDD PH 44 144 - -
Mal8g2275 982 SMART RhoGAP_3 202 392 IPR000198 GO:0007165
Mal8g2275 982 Coils Coil 651 671 - -
Mal8g2275 982 Gene3D Rho GTPase activation protein 175 397 IPR008936 GO:0007165
Mal8g2275 982 SMART PH_update 42 151 IPR001849 -
Mal8g2275 982 MobiDBLite consensus disorder prediction 919 949 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2275 Mal-Chr8 49073758 49091167 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2275 - - cam:101498807 1442.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2275 8 49073758 49091167 Mal8g2275 8 49073758 49091167 ECH