Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2271 ATGCGTGTTACAGTGGATCTAGGGTTTTCTTCTTTGATCTTAATCGCTTTAATTTGCGTTGTTTTGCCTGTGATTGGTTTTGTGATACGTTACAAGTGGAGGCGTGCGGCGGAGAGGGCGGAGGAGGTTAGGAGGTTGTTGATTTTTGCGGCGGAGGAGTCTGCTAGGGTTGAACGTGAGGCGGCAGCTTCGTATCAATACGTTGGTGGCGCGAATTCGTATCAAAACGATGCCGTTCCAGCTTCTTATCAATATGTGAACAAGAATTCGTATCAAAACGGTGCCGTTTCGGTTTCTAAGAAGAAGAATAAGAATAATCAATGTGCTGTGTGTTGTTCTCCCACTACTACGCGGTGTGCAAAGTGCAAAGCGGTTCATTACTGTTCTGGTAAGTGTCAAATTGCTCATTGGCGTCAAGGTCACAAAGACGAATGCCATCCTCCCAGTACAGCTCGCCAGAGCCAGACTGATAATCTGGTATCCAATATTGGTAAGAAGGTAGCTGAGCCAGACTACCGTGGAATCAATGATGAGAAGTCTCGGATTGAAAAAACAGAAGATAGAACATCCTCTGAGAAACCTCCACTGTCTGATGTAAAACTTTCTCCCAAAATTTCATGTGCAGAGAATGATAAAGCAAGGGTTGAGTCTCTTGCAGAGGAGAATATTGCTGACTCTAATTCTGAATTATCATGCAACTCTTTTTCTGGATTCTCTGCTTCCACTGGTGCTAATGAGTCATCTGATGATTCATCTGGTTGTGAGAGTATCATCTCAAATGAGCATGTTAGATCCGAGGGACATATTTGTACTGACCCCACTTTTGACGACTCGGACAACACATTAAATGGTCATAGCATTGGATCCAATATCCCATTGTCACCTAAGTTTGCTAGTTTGGTTGATTCAGTTAGACCTGTTTTTGGTAAAGAAGAGATTAAGCTCACATCAAATGGTAGTTCAGGTTTGACGATGCGGAAAGTGGGAACAACAGAACCTTCTAATGCGTCTTCTGAATTTTGGAATTGCACTCTTGATTTAAAGGGGACAAAAGATGACTCTTTTGCTGACACTCTTCCATCTCACTCTTATGAATCTCTTACGAAGTCTGTTGGGAAAAATATTCCAAATGCCGGATCAGGATCTTCCGAGAATGAAGGTCTTGTTTCTTCATGTCGTGCAGATGCTTCAAGCAACCATAATTCATACACTGTTGGCTCTAAGGTATCAAATCATGTTACGATCAACCCCAGAAGTAGCTTGAGATCTGCTGAAATTAGTTGTCTTCCACAAACATCTGCTGATACTAAATTACGTTCTAAAGCTGAAGAGGAGAAACATTTACATTACAGTTCAAAATGTAAGAACAATGGGACCCGTTCAGTTACTGCTTATTCATCCCAGGGTCTTTTTCCATATGATCTGTTTGTCAAGCTTTATAACTGGAACAAAGTGGAGTTTCAACCATATGGTCTTACAAATTGTGGAAACAGCTGTTATGCAAATGCTGTACTCCAGTGCTTGGTATTTACACCACCATTGTCTGCATATTTGCTTCAAGGACTTCATTCTAAATCATGTGCAAATAAAAAATGGTGTTTCACCTGCGAGTTTCAAAGTTTGATTTTGAAGTCAAAAGACACAAAATCTCCCCTCTCACCCGTAGGCATACTCTCCCAACTACAGAATATTGGAAGTCAGCTTGGTAATGGAAGAGAAGAGGATGCACATGAATTTCTAAGGCATGTGGTTGAAACGATGCAATCTGTTTGCCTTATGGAGTGTGGGGTTGATGCATCAGAAGCATTTAAAGAGCAAACTAATTTAGTTGGTCTTACGTTTGGAGGCTACCTACGATCAAAGATAAAATGCTTGAAATGTGGAGGGAAATCTGAGCGTCAAGAAAGGATGATGGATTTGACTGTTGAGATAGAAGGGGAGATAGCATCCCTGGAGGAGGCCCTTAAACAGTTTACAAGTACCGAAACTCTGGATGGAGAAAACAAGTACCACTGTGCTAGATGTAAATCTTATGAGAAGGCCAAGAAGCAAATGGCAGTTTCAGAGGCACCTAATGTTCTAACCATTGCATTGAAGAGATTTCGGTCTGGAAAATTTGGGAAGCTCAATAAGCCAATTCGGTTTCCTGAAATACTTGACTTGGCACCTTTCATGAGTGGGACTATTGATCTGGCAATATACAGGCTATACGGGGTCGTTGTGCACTTAGATACCATGAATGCTGCTTTTTCAGGTCACTATGTGTCCTATGTGAAGAATTTCCAGAATAGTTGGTTCAAGGTTGATGATAGTGTGGTGACACCTGTTGAATTGGAAACAGTCTTGACAAAAGGCGCGTACATGCTTTTGTATGCAAGGTGCTCACCTAGGGCTCCAAAATTAATCAGGGACATGATAGTGTCCTCGGATTCAAAAAGCAAAGTCAATGGAAAAACTGTCACATTGAAGTTCAAACATGCACATTCGGATTCTGGTTCTGCTGAATGCATGACTAATTCAGTTTCTTCATATGGTTTACCTGCTTTAGAGACTATCCATTCAAAATTTCATCGCATGACAAGTATCATGGAAGAAGACTCATCAAGTGATAATTCATCCCTTATCAGCAACAATTCCGATGAATGTTCTTGCAGCACCGATAGCTCGTGTGATTCTGCGGGTACTGACGAATTTGCGGAATATATTTTTGGTAATTCAGGACGAGGCGGGGGTAGCACATGTTCGAGGGTGGAGATGGACGGTCTTTTGTATAGGAGCAGACCGGTGAACATTGAAAGGAGCGAGGGAGGTGTTTCTCATTTGCATCATAGCACAAGTATAGAGCATAGGAAGTTAGATACATGTAGGAGTAGTAGTAGTTTTAGGGACAGTGATTCTTTTGAGAGAGCAGGGTCCAATCATTTTAGTAATATAAATTCTGGTGTATCATATAGAAAGTCAAGAGAAAGAAAGGATTGA 2979 0.4142 MRVTVDLGFSSLILIALICVVLPVIGFVIRYKWRRAAERAEEVRRLLIFAAEESARVEREAAASYQYVGGANSYQNDAVPASYQYVNKNSYQNGAVSVSKKKNKNNQCAVCCSPTTTRCAKCKAVHYCSGKCQIAHWRQGHKDECHPPSTARQSQTDNLVSNIGKKVAEPDYRGINDEKSRIEKTEDRTSSEKPPLSDVKLSPKISCAENDKARVESLAEENIADSNSELSCNSFSGFSASTGANESSDDSSGCESIISNEHVRSEGHICTDPTFDDSDNTLNGHSIGSNIPLSPKFASLVDSVRPVFGKEEIKLTSNGSSGLTMRKVGTTEPSNASSEFWNCTLDLKGTKDDSFADTLPSHSYESLTKSVGKNIPNAGSGSSENEGLVSSCRADASSNHNSYTVGSKVSNHVTINPRSSLRSAEISCLPQTSADTKLRSKAEEEKHLHYSSKCKNNGTRSVTAYSSQGLFPYDLFVKLYNWNKVEFQPYGLTNCGNSCYANAVLQCLVFTPPLSAYLLQGLHSKSCANKKWCFTCEFQSLILKSKDTKSPLSPVGILSQLQNIGSQLGNGREEDAHEFLRHVVETMQSVCLMECGVDASEAFKEQTNLVGLTFGGYLRSKIKCLKCGGKSERQERMMDLTVEIEGEIASLEEALKQFTSTETLDGENKYHCARCKSYEKAKKQMAVSEAPNVLTIALKRFRSGKFGKLNKPIRFPEILDLAPFMSGTIDLAIYRLYGVVVHLDTMNAAFSGHYVSYVKNFQNSWFKVDDSVVTPVELETVLTKGAYMLLYARCSPRAPKLIRDMIVSSDSKSKVNGKTVTLKFKHAHSDSGSAECMTNSVSSYGLPALETIHSKFHRMTSIMEEDSSSDNSSLISNNSDECSCSTDSSCDSAGTDEFAEYIFGNSGRGGGSTCSRVEMDGLLYRSRPVNIERSEGGVSHLHHSTSIEHRKLDTCRSSSSFRDSDSFERAGSNHFSNINSGVSYRKSRERKD* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2271 992 Pfam MYND finger 108 145 IPR002893 -
Mal8g2271 992 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 919 975 - -
Mal8g2271 992 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 919 975 - -
Mal8g2271 992 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 465 912 - -
Mal8g2271 992 MobiDBLite consensus disorder prediction 143 203 - -
Mal8g2271 992 Pfam Ubiquitin carboxyl-terminal hydrolase 491 791 IPR001394 GO:0004843|GO:0016579
Mal8g2271 992 SUPERFAMILY Cysteine proteinases 486 797 IPR038765 -
Mal8g2271 992 ProSitePatterns Zinc finger MYND-type signature. 108 145 IPR002893 -
Mal8g2271 992 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 19 404 - -
Mal8g2271 992 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 465 912 - -
Mal8g2271 992 SUPERFAMILY HIT/MYND zinc finger-like 104 147 - -
Mal8g2271 992 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 491 506 IPR018200 GO:0004843|GO:0006511
Mal8g2271 992 Gene3D - 91 150 - -
Mal8g2271 992 ProSiteProfiles Zinc finger MYND-type profile. 108 145 IPR002893 -
Mal8g2271 992 MobiDBLite consensus disorder prediction 170 194 - -
Mal8g2271 992 Gene3D Cysteine proteinases 483 804 - -
Mal8g2271 992 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 490 794 IPR028889 -
Mal8g2271 992 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 19 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2271 Mal-Chr8 48994859 49003309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2271 470 798 Miscellaneous Gene Families AT4G31670 51.057 7.68e-118 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2271 K11855 - gmx:100782303 1208.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2271 8 48994859 49003309 Mal8g2271 8 48994859 49003309 ECH