Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2258 ATGAACCTGTTTCCTTCAGAATCTCTCGATTCCATGGATGCTTTCCATAATTCCTCTGCATATCATCAATCGCACAAGTCTCTCGGTTTCTGCAAGGTAAAGGGTTTTGCTAGAAATCCTTGCAATGATGTTGATAGAGTTGGTGGTAACTTTAATTTGGAGATGGGTCTGAACACATTGGGAAAAAATCTTGATTGCAAAAAGAATTCTGAGTTGGAAGCTGTGAAACTATCAAATGGCACCCCTTTGGAAAATCACCAATGTTTTAAACTATCTTTGTTACAGTCAATTCAGAATGAATTAGTTGGGATTAATTTAGAGGCTGATGAATGTATGAAAGAAAGTACTCCATCAAGTTCCGAGTCTGATGTTGCAGCAAATGTATTCTCTCGCAGTATGGATGTGGAAGGCAAAGAAGTTTGTAAACTTGGACAGCCAAGCTACTTCCCAGATTTTCAGGAGGCTTTTGACAAACTTGTCTATCCAGAAGGGGACCCGGATGCTGTTACCCTCAGTAAGAAAGATGTTGATCTATTACAACCAGATACATGCATCAATGACACGATTATCGATTTTTACATTCTATACCTGAAGAATAAGATACGAGAGACGGAAAAGGCTCGGTTCCACTTTTTCAATAGTTTTTTCTTTCGAAAGCTGACTGATATGGACAAAAATCCACCCAATGCTTGTGACGGGAAATCAGCGTTTCTACATGTTCGTAGATGGACAAGAAAAGTAAATTTGTTTGAAAAGGATTATATTTTCATACCTGTGAACTTCAACAATCACTGGAGCTTACTAGTAATTTGCTATCCTGGCGAATTGGTTAATATTAATGACAAAGAGCCGGAAAAGTCGCTTAGGCTACCCTGCATATTGCATATGGATTCTATCAAGGGACATCATAGTGGTCTGAAAGACCTTGTGCAAAGTTATTTGTGTGAAGAATGGAAAGAGAGGAACAAGGATACATGTGGAGAAGACCTCTCATCAAGATTCTTGAATATGCGTTTTATCCCCGTTGCGGTACCACAGCAGGAAAACTCATTCGATTGTGGCCTCTTTTTGCTTCATTATCTAGAGCTCTTCCTGGCTCAATCGCCGTTTAATTTCAATCCGTTGATACTAAACAAGTTCTCCAAATTTCTCAATTTGGACTGGTTTCCACCTGTGGAGCCGTATTTCAAGCGACCGCTTATCCGTAGGTTAATCTTTAATCTGGTGGAAAACCATGGTCACCACTGCTCAGAATATAATGACAACAAGATTGGTGGTCAGAGTCATTTAATCAATGGGGAGGCGTCAACTTCCCATGCTGGCCGAGGAATAGAAATGGCTCCATCTTTTGATACTTCAAGGAAGGTTCTTAAGGAGTATTTTGAACCAGGAACTGCACTGGGATTTTCAGTGAGACATTGCCAATCTTTTGATCAGCGATCATCTAATCACTATACGGATTTCAGTGCGCATCTACAAGCAGAGCATGTAAATGCCAAGTCATCTCTAGATACATCAAGTTGTGCATCGGATGATTCAGACGTAAAGATGATTGAAAATCTCCCAGTTAAGAAAAAACCAAAACCATATTGGATGTCCATAGAAAACCTTCAGCATTTACAACATGTGAATGATTCCGCTGCTACTATCAATGTTCCGGTTAAAAAAGAATCAAAATCATATTGGATGTCCGTAGAAAACCTTAGGTCTTTACAAGATATGAATGATTCTGCTGCTGCTGTCAATTTGCCAGATTTGAATGGTTCTGCTGCTACTGTCAATTTGCCAGATTTGAACGATTCAGCAGAGATCATTGAAACTTTCCCTGTTAAAAACGAATCAAGAGATGGACGTGGAGAAAATTGCAAATCCATGGAAAAGCTTGAGCATTTGCCGGATATGAATGATTCTGCTGCCACTCTCAATTTGCCGGTTAAAAAAGAATCAACTTATTGGATGTCCATAGATAATATTCGGCATTTACAAGAAAAGAATGATTCTGCTGCTGCTGCTGCTGCTATCAGTTCACCAGAAGTGAACGGTTCTGATGACCTAGCGATCATTCAAAATTTCCCGATTAAAAAGGAATCAAGATCATCGCTTGGACGTGAAGAAACAAATTGTACGTCCGTAGGAAACCTTACACATTTACCTGATATGAATTATTCGCAACACTTGAATATGATGTGTGCTAACAACATGCATTGGTATCAACACTTGTCCCCAACTCAACTATTGCATCATGTTTCTAATGCAGTAGATAACAAGGTCATCGATGATGATGTTCAGATTACTAACAACATGAATCTTGAATTATGGAATGAACGACCTGCAAAGAAGAGGCGGCTAATGACATAA 2358 0.3927 MNLFPSESLDSMDAFHNSSAYHQSHKSLGFCKVKGFARNPCNDVDRVGGNFNLEMGLNTLGKNLDCKKNSELEAVKLSNGTPLENHQCFKLSLLQSIQNELVGINLEADECMKESTPSSSESDVAANVFSRSMDVEGKEVCKLGQPSYFPDFQEAFDKLVYPEGDPDAVTLSKKDVDLLQPDTCINDTIIDFYILYLKNKIRETEKARFHFFNSFFFRKLTDMDKNPPNACDGKSAFLHVRRWTRKVNLFEKDYIFIPVNFNNHWSLLVICYPGELVNINDKEPEKSLRLPCILHMDSIKGHHSGLKDLVQSYLCEEWKERNKDTCGEDLSSRFLNMRFIPVAVPQQENSFDCGLFLLHYLELFLAQSPFNFNPLILNKFSKFLNLDWFPPVEPYFKRPLIRRLIFNLVENHGHHCSEYNDNKIGGQSHLINGEASTSHAGRGIEMAPSFDTSRKVLKEYFEPGTALGFSVRHCQSFDQRSSNHYTDFSAHLQAEHVNAKSSLDTSSCASDDSDVKMIENLPVKKKPKPYWMSIENLQHLQHVNDSAATINVPVKKESKSYWMSVENLRSLQDMNDSAAAVNLPDLNGSAATVNLPDLNDSAEIIETFPVKNESRDGRGENCKSMEKLEHLPDMNDSAATLNLPVKKESTYWMSIDNIRHLQEKNDSAAAAAAISSPEVNGSDDLAIIQNFPIKKESRSSLGREETNCTSVGNLTHLPDMNYSQHLNMMCANNMHWYQHLSPTQLLHHVSNAVDNKVIDDDVQITNNMNLELWNERPAKKRRLMT* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2258 785 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 75 666 - -
Mal8g2258 785 Gene3D - 161 406 - -
Mal8g2258 785 ProSiteProfiles Ubiquitin-like protease family profile. 169 364 IPR003653 GO:0006508|GO:0008234
Mal8g2258 785 Gene3D - 209 341 - -
Mal8g2258 785 SUPERFAMILY Cysteine proteinases 160 409 IPR038765 -
Mal8g2258 785 Pfam Ulp1 protease family, C-terminal catalytic domain 185 385 IPR003653 GO:0006508|GO:0008234
Mal8g2258 785 Coils Coil 94 114 - -
Mal8g2258 785 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 677 785 - -
Mal8g2258 785 PANTHER ULP1 PROTEASE FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 75 666 - -
Mal8g2258 785 PANTHER ULP1 PROTEASE FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 677 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2258 Mal-Chr8 48743960 48749066 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2258 K08596 - gmx:102664785 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2258 8 48743960 48749066 Mal8g2258 8 48743960 48749066 ECH