Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2241 ATGGATTTGGAAACTCTTCATACAATTTTAACCAAATCACTCACCATCCTTGCCTGGCCTCCAATGAGTTTGCTTTGTCCGTTATATGTTTCTATTCGGACATTGGGGAGTGATTGTCGTTCCAGTCATCAGCGATGTCTTTCTTATTGGGTTCTCTGTTCTTTAACTATGATCATCGAATGTGAATTTCCTGTGTTATTTACCTGGCTTCCATGGTGGCCCCATGTGAAAGCCATGATAACTATCTATCTGTTAATACCCTATTTTGGTGCTGCGCCATGCGTCTACAAGTTCTTAATTGAGCGCTACTGTACTTGGAACATATGTGCATGGACATTGAACATTTTCAATCTGAAAATCACACATTTTGAATTGGACGAGGATAGCAATATACTTTCAGAATCGGATGAGGGCCGGAAAATTTTATTCGAATCAGATGTTGATAGAACAAGTATTGAGCTCTCTGGCCAGACAATTATTACAAATCATTTGCAAGAGAAGAAACTCTTCGTATATCAGGGGAGAGATGATCTTGCTGATTGTGACAAGACAAAAAGCGGTTATACAAGTAAAAAGAAAGTCCAGAAGGAATGGAGCTGTGCTTTATGTCAAATTAGTACTACTAGTGAAAATTGCTTAGGGTCACATCTTCAAGGGAAGCAACACAAGGCTAAGGAAAAAGAACTTCGAGTCGGGTTACATGCAACAAATATACCGTATGTTCTATCCTTTACGCAGGAAAGAATCAAAGGAACGGTTCTAGTTAGGAATCTCAACCAAATCGCAAAGATGCTGAATCCAGTTTCTAGATCCATAGTATGGTGTGAATGGAAAAAGCCGGAATTTGGATGGACAAAACTAAATACCGACGGTTCTGTAAATAAAGAAACCGCTGGTTTTGGTGGTCTGCTTCGTGATTACCGGGGAGAACCAATTTGCGCATTTGTTTCGAAAGCTCCTCAAGGAGATACTTTCTTGGTGGAACTTTGGGCTATATGGAGAGGCCTTGTTCTCTCCTTAGGTCTTGGGATAAAATCAATATGGGTGGAGTCAGATTCCATGAGTGTTGTGAAGACAATCAATAAAATGCAACATTGTCCAAAAGCGGAAACCTGTTTGAAACAAATCTGGAAACTGTTGACTAAGTTTGATGAACATCGAATTTCTCACTCGTGGCGCGAAACTAATAGAGCAGCAGATCATCTTGCAAAGATGGCTCTTTGTGGAAATGATGTGGTTTTGTGGCCAGTTGATTTTTCACATAGCCTTTGCAATATCATTCAAGATGATGCCAGAGGAACGAAATATCTTAGACGGTGA 1320 0.4008 MDLETLHTILTKSLTILAWPPMSLLCPLYVSIRTLGSDCRSSHQRCLSYWVLCSLTMIIECEFPVLFTWLPWWPHVKAMITIYLLIPYFGAAPCVYKFLIERYCTWNICAWTLNIFNLKITHFELDEDSNILSESDEGRKILFESDVDRTSIELSGQTIITNHLQEKKLFVYQGRDDLADCDKTKSGYTSKKKVQKEWSCALCQISTTSENCLGSHLQGKQHKAKEKELRVGLHATNIPYVLSFTQERIKGTVLVRNLNQIAKMLNPVSRSIVWCEWKKPEFGWTKLNTDGSVNKETAGFGGLLRDYRGEPICAFVSKAPQGDTFLVELWAIWRGLVLSLGLGIKSIWVESDSMSVVKTINKMQHCPKAETCLKQIWKLLTKFDEHRISHSWRETNRAADHLAKMALCGNDVVLWPVDFSHSLCNIIQDDARGTKYLRR* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2241 439 Gene3D Classic Zinc Finger 183 234 - -
Mal8g2241 439 SUPERFAMILY Ribonuclease H-like 284 414 IPR012337 -
Mal8g2241 439 PANTHER PROTEIN A, PUTATIVE ISOFORM 1-RELATED 11 439 - -
Mal8g2241 439 CDD RNase_H_like 287 404 IPR044730 -
Mal8g2241 439 ProSiteProfiles RNase H type-1 domain profile. 281 408 IPR002156 GO:0003676|GO:0004523
Mal8g2241 439 SMART ZnF_U1_5 195 229 IPR003604 GO:0003676|GO:0008270
Mal8g2241 439 Gene3D - 284 407 IPR036397 GO:0003676
Mal8g2241 439 PANTHER HVA22-LIKE PROTEINS 11 439 IPR004345 -
Mal8g2241 439 SUPERFAMILY beta-beta-alpha zinc fingers 186 231 IPR036236 -
Mal8g2241 439 Pfam Reverse transcriptase-like 288 406 IPR002156 GO:0003676|GO:0004523
Mal8g2241 439 Pfam Zinc-finger of C2H2 type 198 222 - -
Mal8g2241 439 Pfam TB2/DP1, HVA22 family 27 102 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2241 Mal-Chr8 48486682 48490319 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2241 276 407 Glycoside Hydrolase AT2G33160 27.536 1.64e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2241 - - gmx:102661917 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2241 8 48486682 48490319 Mal8g2241 8 48486682 48490319 ECH