Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2173 ATGGCTGTTTCAACTAGTTTCTATGGTTCAAAATTGGAGCCTTTGTTCCTTAAATGTTGTTCTTCATCTTCATCATCATTATCATACTCTTATGTTACTACTCATTTATCATTTTTTGCTAGAAACAAAAAGAGCCAGAGAGGTTCAGTTATTCGATGTGAAGCTTCTTCTTCTGATGGTTTGGTTGATCCTAGTGATAATGCTAAAGCTGTTTCTGCTTTACAACAGCTTAAAGCTTCTGCAGCTGATAGATATACAAAGGAAAGGAGCAGCATTGTGGTTATTGGGCTAAGTGTGCATACTACACCGGTGGAAATGCGCGAAAAACTTGCCATACCAGAAGCAGAATGGCCTAGAGCAATTGGTGAGCTTTGTAATCTGAATCATATTGAAGAAGCAGCTGTTCTGAGCACATGTAACCGAATGGAGATATATGTTGTTGCACTTTCTCAGCACCGTGGTGTCAAAGAAGTCACTGAATGGATGTCGAATACAAGTGGTATACCTGCATCAGAGCTTTCAAAGTATCTATTTTTGCTATACAACAAAGATGCAACACAACACCTTTTTGAAGTATCAGCAGGTCTTGATTCTCTTGTAATGGGAGAAGGTCAAATCCTTGCACAAGTGAAGCAAGTTGTAAAAGCAGGACAAGGAGTTAATGGCTTTGGAAGAAACATCAGTGGTCTATTCAAGCACGCAATCACCGTCGGTAAAAGGGTCCGAACCGAGACCAACATTGCGGCCGGTGCAGTTTCCGTGAGCTCGGCTGCAGTCGAATTAGCCTTGATGAAATTACCTGATCAAGCCTCACATGGCAATGCAAGAATGGTAGTTATTGGAGCTGGAAAAATGGGGAAGCTTGTGATCAAACATTTGGTTGCAAAAGGGTGTAAAAAGATGGTAGTTGTTAATCGAACCGAAGAGAGAGTCACGGCGATCCGTGAAGAAATAAATGATGTTGAGATAATCTACAAACCGCTTTCGGAAATGCTCGAATGTGTTGGTGAAGCAGATGTTGTCTTCACAAGCACTGCATCAGAGAATCCTTTGATTTTGAAACAACATGTTAAGGAACTTCCTTTAGCAAGCGAAGAAATGAGAGGAAAACGCCTCTTCGTTGATATTTCTGTTCCGAGAAACGTAGGTTCGTGTGTCGATGATCTTGAGTCTGTGAAGGTTTACAATGTTGATGATCTTAAAGAGGTTGTGGCTGCTAACAAAGAGGATAGGCTAAGAAAAGCAATGGAAGCACAAGTGATCATCGGCGAAGAATCAGGACAATTTGAAGCTTGGAGAGACTCATTAGAAACTGTTCCTACCATTAAGAAATTAAGGGCATATGCTGAAAGATTAAGGGTTGCTGAGCTTGAGAAATGTTTAGGTAAAATGAGTGATGATGTTAATAAAAAGACACAAAAAGCTGTGGATGATCTTAGTAAAGGTATAGTAAATAAAATGCTTCATGGTCCAATGCAACATTTGAGATGTGATGGGAGTGATAGTAGAACTTTGAGTGAGACACTTGAGAATATGCATGCTTTGAATAGAATGTTTAGTCTTGAAACTGAGGTTTCTGTTTTGGAGCAGAAGATAAGAGCTAAGGTGGAGCAAAAACCATAG 1623 0.4005 MAVSTSFYGSKLEPLFLKCCSSSSSSLSYSYVTTHLSFFARNKKSQRGSVIRCEASSSDGLVDPSDNAKAVSALQQLKASAADRYTKERSSIVVIGLSVHTTPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSNTSGIPASELSKYLFLLYNKDATQHLFEVSAGLDSLVMGEGQILAQVKQVVKAGQGVNGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPDQASHGNARMVVIGAGKMGKLVIKHLVAKGCKKMVVVNRTEERVTAIREEINDVEIIYKPLSEMLECVGEADVVFTSTASENPLILKQHVKELPLASEEMRGKRLFVDISVPRNVGSCVDDLESVKVYNVDDLKEVVAANKEDRLRKAMEAQVIIGEESGQFEAWRDSLETVPTIKKLRAYAERLRVAELEKCLGKMSDDVNKKTQKAVDDLSKGIVNKMLHGPMQHLRCDGSDSRTLSETLENMHALNRMFSLETEVSVLEQKIRAKVEQKP* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2173 540 PANTHER GLUTAMYL-TRNA REDUCTASE 1 539 - -
Mal8g2173 540 Pfam Glutamyl-tRNAGlu reductase, dimerisation domain 417 521 IPR015896 GO:0008883|GO:0033014|GO:0050661
Mal8g2173 540 Pfam Glutamyl-tRNAGlu reductase, N-terminal domain 95 245 IPR015895 GO:0008883|GO:0033014|GO:0050661
Mal8g2173 540 Pfam Shikimate / quinate 5-dehydrogenase 262 403 IPR006151 -
Mal8g2173 540 SUPERFAMILY Glutamyl tRNA-reductase catalytic, N-terminal domain 91 247 IPR036343 GO:0008883|GO:0033014|GO:0050661
Mal8g2173 540 PANTHER GLUTAMYL-TRNA REDUCTASE 1, CHLOROPLASTIC 1 539 - -
Mal8g2173 540 Hamap Glutamyl-tRNA reductase [hemA]. 91 519 IPR000343 GO:0008883|GO:0033014|GO:0050661
Mal8g2173 540 Gene3D - 90 250 IPR036343 GO:0008883|GO:0033014|GO:0050661
Mal8g2173 540 TIGRFAM hemA: glutamyl-tRNA reductase 92 501 IPR000343 GO:0008883|GO:0033014|GO:0050661
Mal8g2173 540 SUPERFAMILY Glutamyl tRNA-reductase dimerization domain 415 501 IPR036453 GO:0008883|GO:0033014|GO:0050661
Mal8g2173 540 ProSitePatterns Glutamyl-tRNA reductase signature. 188 211 IPR018214 GO:0008883
Mal8g2173 540 Gene3D - 251 404 - -
Mal8g2173 540 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 250 411 IPR036291 -
Mal8g2173 540 Coils Coil 304 324 - -
Mal8g2173 540 CDD NAD_bind_Glutamyl_tRNA_reduct 92 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2173 Mal-Chr8 46427338 46430523 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2173 K02492 - gmx:100819951 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2173 8 46427338 46430523 Mal8g2173 8 46427338 46430523 ECH