Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1955 ATGCCTATAGAGAAAGAAGATCACAACAAGAAATTAGTAATTGACTTATACAAAGCCTTAGTTACCAAAGACACAAACACAATGCAAATTCTTCTTGCCTCAGATTTGGAGTGGTGGTTCCATGGTCCACCATTGATTGTTGCTGAAGGGTATGATGAAAAAAACATGGTTTGGTGGGTTCATGCATGGTCAATTTGTGATGGAATCATCACTGAGGTTAGAGAATATGTTAACACTTCGGTTAGTGTTACTAAGCTTGGTTTGCATTCAGAAGATGATGTTGTTGGTTCCACTTGTAGGTGCATTTGGCAGAGTAAGCTTTGTGATGGTTCTGTTCCTGGACTCATTCTCACAATTTAG 360 0.3889 MPIEKEDHNKKLVIDLYKALVTKDTNTMQILLASDLEWWFHGPPLIVAEGYDEKNMVWWVHAWSICDGIITEVREYVNTSVSVTKLGLHSEDDVVGSTCRCIWQSKLCDGSVPGLILTI* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1955 119 Pfam Wound-induced protein WI12 46 119 IPR009798 -
Mal8g1955 119 SUPERFAMILY NTF2-like 8 83 IPR032710 -
Mal8g1955 119 PANTHER OS07G0691300 PROTEIN 45 119 IPR009798 -
Mal8g1955 119 PANTHER OS07G0691300 PROTEIN 4 44 IPR009798 -
Mal8g1955 119 PANTHER WOUND-INDUCED PROTEIN, WUN1-RELATED 4 44 - -
Mal8g1955 119 PANTHER WOUND-INDUCED PROTEIN, WUN1-RELATED 45 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1955 Mal-Chr8 40404389 40404830 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1955 - - var:108336652 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1955 8 40404389 40404830 Mal8g1955 8 40404389 40404830 ECH
Mal8g1955 8 40404389 40404830 Mal2g2654 2 34087784 34088113 ECH
Mal8g1955 8 40404389 40404830 Mal2g2906 2 38788884 38789372 ECH
Mal3g2394 3 94551894 94552349 Mal8g1955 8 40404389 40404830 ECH