Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1419 ATGGCTCTGTTTTCCTCTGTTTCACTCTGCATGCTTCTTCTCTCATCTTTCTTTTTCTTCACATGTTTCTCATCAAAACATAATAATCACAACAATGTTAAGAACTCCCTTTCTTTTCCTCTAACCTTTCTTCCACTTTCCACAAACACAAAACCAAACCCACAAATCCCAAACATTTCACCTTACAAATATTCTTTGGCTCTTGTTGTGACTCTTCCCATTGGAACACCACCACAGCCTCAACAAATGGTTTTAGACACAGGAAGCCAACTTTCATGGGTTCAATGCAACAACAAAAAAGCACCACAAAAGAAACAACAATCTCCTACGACATCATCATTTGATCCTTCTCTTTCCTCTTCTTTCTTTTCTCTCCCATGTAACCACCCCATTTGTAAACCTCAAGTTCCCGATTTTAGCCTTCCCACGGATTGTGATGCTAATCGTTTATGTCACTATTCTTTTTTCTATGCTGATGGAACTTTAGCTGAGGGTAATCTTGTAAGAGAAAAAATTTCTTTATCTCCTTCCCAAAATACCCCTCCTATTATCATCGGTTGCGCTAGCGCTAATCAAACCGACGATACTAGGGGTATTTTGGGATTGAATCTTGGCCGTCTCTCATTCGCTTCTCAATCTAAAATAACCAAATTCTCTTATTTTGTACCTACAAAACAAACCCAACCTAGTTCCGGTTCTTTTTACATTGGAAATAATCCACATTCATCGTGTTTTCGTTACATTAAATTGTTGACTTTTAGTAAAAGTAAAAGTCAACGCATGCCGAATATGGATCCCTTGGCCTTCACGCTTCCAATGCAAGGGATTAGCATTGCTGGGAAGAAATTGAATATTCCGCCTTCTGTTTTTAAACCAAGTGCTGGTGGGTTTGGTCAAACCATGATTGATTCTGGATCAGAATTCACTTACATGGTGGATGAAGCTTATAATGTGATACGTGAGGAGTTAGTGAAAAAGGTGGGAGCCAAGATTAAGAAGGATTATGTGTACGGTGGAGTAGTAGACATTTGTTTTGATGGAGATGCAACTGAAATTGGAAGACTTGTGGGAGACATGGTGTTTGAGTTTGAGAGAGGGGTGCAAATAGTGATTCCGAAAGAGAGAGTTCTCATTGAGGTGGATGGTGGTGTCCACTGTTTTGGAATTGGAAGGGCAGAAAGATTAGGTGCAGGGGGTAACATTATTGGCAACTTCTATCAACAAAATCTATGGGTAGAGTTTGATCTAGCCAAACATAGAGTTGGTTTCGGTGGGGTTGATTGTAGCAAATCAGTTAAATAA 1302 0.3948 MALFSSVSLCMLLLSSFFFFTCFSSKHNNHNNVKNSLSFPLTFLPLSTNTKPNPQIPNISPYKYSLALVVTLPIGTPPQPQQMVLDTGSQLSWVQCNNKKAPQKKQQSPTTSSFDPSLSSSFFSLPCNHPICKPQVPDFSLPTDCDANRLCHYSFFYADGTLAEGNLVREKISLSPSQNTPPIIIGCASANQTDDTRGILGLNLGRLSFASQSKITKFSYFVPTKQTQPSSGSFYIGNNPHSSCFRYIKLLTFSKSKSQRMPNMDPLAFTLPMQGISIAGKKLNIPPSVFKPSAGGFGQTMIDSGSEFTYMVDEAYNVIREELVKKVGAKIKKDYVYGGVVDICFDGDATEIGRLVGDMVFEFERGVQIVIPKERVLIEVDGGVHCFGIGRAERLGAGGNIIGNFYQQNLWVEFDLAKHRVGFGGVDCSKSVK* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1419 433 ProSiteProfiles Peptidase family A1 domain profile. 68 424 IPR033121 -
Mal8g1419 433 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 17 432 - -
Mal8g1419 433 Pfam Xylanase inhibitor N-terminal 69 238 IPR032861 -
Mal8g1419 433 SUPERFAMILY Acid proteases 69 430 IPR021109 -
Mal8g1419 433 CDD pepsin_A_like_plant 69 428 IPR034161 -
Mal8g1419 433 PANTHER ASPARTYL PROTEASE-RELATED 17 432 IPR001461 GO:0004190|GO:0006508
Mal8g1419 433 Pfam Xylanase inhibitor C-terminal 269 423 IPR032799 -
Mal8g1419 433 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 83 94 IPR001969 GO:0004190|GO:0006508
Mal8g1419 433 PRINTS Pepsin (A1) aspartic protease family signature 400 415 IPR001461 GO:0004190|GO:0006508
Mal8g1419 433 PRINTS Pepsin (A1) aspartic protease family signature 74 94 IPR001461 GO:0004190|GO:0006508
Mal8g1419 433 PRINTS Pepsin (A1) aspartic protease family signature 300 311 IPR001461 GO:0004190|GO:0006508
Mal8g1419 433 Gene3D Acid Proteases 237 432 IPR021109 -
Mal8g1419 433 Gene3D Acid Proteases 46 236 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1419 Mal-Chr8 26912874 26914175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1419 58 430 Miscellaneous Gene Families AT1G77480 27.525 4.44e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1419 - - gmx:100790706 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3140 2 44710120 44711493 Mal8g1419 8 26912874 26914175 PCT