Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1368 ATGGATGATGAAGTGCGCAAGATCTTCAGCAAATTTGACAAAAACGGCGATGGAAAAATCTCACGTTCAGAACTGAAGGAAATGCTCTTATCACTCGGATCAGAAACGACATCGGAAGAAGTGAAACGCATGATGGAGGAACTCGATCAAAACGGCGACGGTTTCATTGATCTGAAAGAATTCGCAGATTTTCACTGCACCGAGCCTGGAAAAGATGAATCTAGCGAGCTTCGTGATGCTTTTGATCTTTACGATCTTGATAAGAACGGTTTGATTTCTGCTAATGAATTGCACGCTGTTTTGAAGAAACTCGGTGAGAAATGCTCGTTGAATGATTGTAAGAAGATGATAAGTAATGTTGATGTTGACGGTGATGGAAATGTTAACTTTGAAGAGTTCAAGAAGATGATGGCTCGCTGA 420 0.4095 MDDEVRKIFSKFDKNGDGKISRSELKEMLLSLGSETTSEEVKRMMEELDQNGDGFIDLKEFADFHCTEPGKDESSELRDAFDLYDLDKNGLISANELHAVLKKLGEKCSLNDCKKMISNVDVDGDGNVNFEEFKKMMAR* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1368 139 ProSitePatterns EF-hand calcium-binding domain. 49 61 IPR018247 -
Mal8g1368 139 SMART efh_1 4 32 IPR002048 GO:0005509
Mal8g1368 139 SMART efh_1 112 139 IPR002048 GO:0005509
Mal8g1368 139 SMART efh_1 40 68 IPR002048 GO:0005509
Mal8g1368 139 SMART efh_1 76 104 IPR002048 GO:0005509
Mal8g1368 139 CDD EFh 76 138 IPR002048 GO:0005509
Mal8g1368 139 Gene3D - 67 139 - -
Mal8g1368 139 ProSiteProfiles EF-hand calcium-binding domain profile. 108 139 IPR002048 GO:0005509
Mal8g1368 139 ProSiteProfiles EF-hand calcium-binding domain profile. 36 71 IPR002048 GO:0005509
Mal8g1368 139 Gene3D - 1 66 - -
Mal8g1368 139 ProSitePatterns EF-hand calcium-binding domain. 85 97 IPR018247 -
Mal8g1368 139 ProSitePatterns EF-hand calcium-binding domain. 121 133 IPR018247 -
Mal8g1368 139 SUPERFAMILY EF-hand 3 138 IPR011992 -
Mal8g1368 139 CDD EFh 4 65 IPR002048 GO:0005509
Mal8g1368 139 ProSiteProfiles EF-hand calcium-binding domain profile. 72 107 IPR002048 GO:0005509
Mal8g1368 139 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 1 139 - -
Mal8g1368 139 ProSiteProfiles EF-hand calcium-binding domain profile. 1 35 IPR002048 GO:0005509
Mal8g1368 139 PANTHER EF HAND CALCIUM-BINDING FAMILY PROTEIN 1 139 - -
Mal8g1368 139 ProSitePatterns EF-hand calcium-binding domain. 13 25 IPR018247 -
Mal8g1368 139 Pfam EF-hand domain pair 76 137 IPR002048 GO:0005509
Mal8g1368 139 Pfam EF-hand domain pair 4 64 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1368 Mal-Chr8 25682903 25683322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1368 3 138 EF-hand Containing Proteins AT5G37770 55.319 6.87e-50 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1368 K13448 - gmx:100796491 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2899 2 38534229 38534645 Mal8g1368 8 25682903 25683322 PCT