Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1335 ATGGCTCACTGCTCTATCAAGGATACCGGTATAGCGGAATCCCAATTGAGTTGGTGGTATCTCGTATCGTCTTACGAAGAACTCAAAACAGGGAAACAAAAGGTGAAAACCTCGGCCGAGAGTTTCAGTTGCCCGTACTGCCCCGAGAGGAAGCAGGATTATAAGTTAAATGAACTCCTTAATCATGCCACTGGGATTGGTAGGAGTAGTTCAGATAAGAGAAGTGCTAAAGAGAAGGGTAGTCATTTGGCTTTGGTAAAATATTTGGAGCAAGATCTTACGAGCAAGGATGGTGCATCGAGACCTGTAGATCAAGGCACAAACACAATAACTCCAGGACAAACTGTAATGTCTCACTGTTCTATCAAGGATACCGATATAAGTTGGTGGTATGTAGATACAGCTTATGAAGAGCTCAAAAATGGAATTCAGAATGTGAAAGCCTCGGAGGATACTTTCATCTGTCCGTACTGCCCTAATAGAAAGCAGGATTATGCATACAGGGAACTCCTAGAGCATTCTTTTATGGTCGGTCGGAGTAGTTCAGAAAAGAGAAGTGCTCGAGAGAGGGCTAATCATCTGGCTTTGTTGAAATATTTAGAAAAGGATATTGGGAGTATGCCTGCACCGTCAAGACCTTTTTTTGTCGATAAAGGTACAAAAGTGATTAGTCAAGAACAAACTGTCACGGCTGCATGCTCTAACAATGATATTGGTTCAAGGGATTTGTATGTAGATAAATTTTATAAAGAACTGAAGAAGGGAAGTCTCAAAGTGAGAATCTCAGACGAGACTTTCACTTGTCCATACTGCCCGAAAATGAAAAAACCGGAATATGTGTACAGGGAAATCCTTGAACATGCTTCCGGGGTCGGTCAGAGTAGTTCGCAAAAAAGAAGTATCAGAGAGAAGGCAACTCATCTGGCTTTAATGAGATATTTGAAAAACGATATTTTTATGAATGTGACTGCTCCATCAAAACCTGAGAATGAAGGAACCGTAATACCAAGCCGAGAAGAAAATGCGACGACTCGCTGCTCCGACAAAGATTCTGATAAAACCGCATCTCAAATAAATTTGGGGCAGTTAAAAAAAACATATGAACAGCTCAAAAAGGGGATTCAAAATGTGAAAACCTCAGATAAGACTTTCACTTGCCCGTACTGCCCTAATAATAAAAAGAGAAAACGGGATTACGTGTACAGGGAAATCCTTGAACATGCTTCTGGGGTGGGTTGGAGTATCTCACAAAATAGAAGTGCCATTGAAAAGGCAGATCATCTGGCTTTGGTCAAATATTTGAAAAAGGATCTTATAAATGTCGGCGGTCCTTTGGAACCAACGAATGGAGGGACCATAACGTGGAACCGAGCAGAAACTGTAACAGGTCGCCACTTTGAGAAGGATACTAATCAAAGGACATCTCAAATAAATGCGTTGTTTGTAAATAAATCCTATGCAGACCTCAAGAAGGGAATTCACAGGGTCAAAACATCAGAAGAAACTTTCTCATGTCCGTATTGCCCTAAGAGAAAATGCGATTATAGGTACAGTGAACTCCTTAATCATGCTTTAGGGGTTGGTCAAAGTGACTCACAAAAGAGAAGTGTATTGGAAAAGGCCAATCATCTAGCTTTAGTGAAGTATTTGGAAAAGGATCTTATGATTATGAATGTGGAACATCCATTAAAGCCTGCAAATAAATATTTGGAAAATAATCATATGAATGTGGAACAAAATCAAACAAAACCAGTGAATGAAAACATTCTTGTCAATTCTGAAAGGCAGTTTGTGTGGCCTTGGACCGGGATTGTGGTTAACATTCCCACGAGACAGACAGAAGACGGACAATGTTTTGGTGAAAGTGGTTCCAAGCTAAGGGATGAATACCGAATAAGGGGTTTTAATCCTCGTAGAGTCCGAACACTTTGGAATCCCTGGGGTCACACTGGAGCTGCAGTTGTGGAATTCAATAAAAGTTGGCTAGGGTTATATAATGCACTGGCATTTGAAAGGGCGTATGAATTAGATTGTCACGGGAAAAAGGACTGGCTTTCTTATACCGAACAAAAATCCGGTCTTTATGCGTGGGTTGCCCGAGCTGATGACTACGAAATGAACAACATAATCGGGGAACAACTACAAAAAATGGATGTTAAAACAATACCTGAAATCATGGACCAAGATGCTAGAAGGTTCAATAAACTCGTGTCGAGTATGCACAACATTCTTCAGGTAAAGAACAACAAGATAAAAGAAATGGAAGTAGTATGCGAAGAAATTACACTTCGCATGGACATTGTGATGGGCGAAATAGATAGACTCGCTCAATCTCACAGTCAAGAGATGAAGAAAATACAGTCAAGTGCAAATCAACACTTTCAGAGTGTTTTGAATGGTCATGAAAGGCTTAAGTTGCAACTGGAATCTCAGAAAAGAGAACTTGAGTTGCGAAGAATTGAACTGGAAAAACGAGAGGCACATAATGAAAGTGAAAGAAAAAAGTTGGAAGAAGAGATTAATAAGACTGCAACGAAAAATCGCTTTCTTCAAATGGCTTCTCTGGAGCAACAAAAAGCTGGTGAAAATGTTTTGAAACTTGCTGCAGATCAAAAGCGGCAAAAAGAACAACTCCATGCTAAAATCATCCAGCTTGAAAAACAACTAAATGTGAAACAAAAACTGGAATTGGAGATTCAGCAACTAAAAGGAAAACTAAATGTCATGAAGCACATGGAAGATGATGGAGATGATGGAGACCTTGATGTTCTGGATATGATGGATGCCTTACATATAGATTTAAGGGAGAAGGAACAGTCACTTCGAGACATGGACGCATTGAACCAAACTCTGATCATTAAAGAGCGTAAGAGCAATGATGAACTGCAGGAAGCTCGAAAGGAATTGATTAGTACTATTAAAGAGATGCCGAGTCGTGGCGATATTCGTGTAAAGAGAATGGGAGAGCTAGACATTAGACCCTTTCTAGAAGCTATGAAGAAAAAATATAATGAAGATGTTGCAGAAGATAGAGCTTCGGAACTGTGTTCGTTATGGGAAGAGTATCTGAAGGACCCTGACTGGCATCCATTTAAAATTTCTATAATCGAAGGGAAACATCAGGAAGCTATAGACGATGAAGATGAAAAGCTGAAAGAACTGAGAAACGAGATGGGCGAAGAAGTTTACAAAGCTGTGGTGGCAGCATTAAAAGAGATAAATGAATATAATCCAAGTGGGCGGTACATAACCTCAGAATTATGGAATTATGCAGAGGGAAAGAGAGCGACTTTGCAAGAAGGAGTGCAAGTTTTATTGAAGCAGTGGAAATTGCATAGACAAAAAAGGGGAATGATATGA 3360 0.3994 MAHCSIKDTGIAESQLSWWYLVSSYEELKTGKQKVKTSAESFSCPYCPERKQDYKLNELLNHATGIGRSSSDKRSAKEKGSHLALVKYLEQDLTSKDGASRPVDQGTNTITPGQTVMSHCSIKDTDISWWYVDTAYEELKNGIQNVKASEDTFICPYCPNRKQDYAYRELLEHSFMVGRSSSEKRSARERANHLALLKYLEKDIGSMPAPSRPFFVDKGTKVISQEQTVTAACSNNDIGSRDLYVDKFYKELKKGSLKVRISDETFTCPYCPKMKKPEYVYREILEHASGVGQSSSQKRSIREKATHLALMRYLKNDIFMNVTAPSKPENEGTVIPSREENATTRCSDKDSDKTASQINLGQLKKTYEQLKKGIQNVKTSDKTFTCPYCPNNKKRKRDYVYREILEHASGVGWSISQNRSAIEKADHLALVKYLKKDLINVGGPLEPTNGGTITWNRAETVTGRHFEKDTNQRTSQINALFVNKSYADLKKGIHRVKTSEETFSCPYCPKRKCDYRYSELLNHALGVGQSDSQKRSVLEKANHLALVKYLEKDLMIMNVEHPLKPANKYLENNHMNVEQNQTKPVNENILVNSERQFVWPWTGIVVNIPTRQTEDGQCFGESGSKLRDEYRIRGFNPRRVRTLWNPWGHTGAAVVEFNKSWLGLYNALAFERAYELDCHGKKDWLSYTEQKSGLYAWVARADDYEMNNIIGEQLQKMDVKTIPEIMDQDARRFNKLVSSMHNILQVKNNKIKEMEVVCEEITLRMDIVMGEIDRLAQSHSQEMKKIQSSANQHFQSVLNGHERLKLQLESQKRELELRRIELEKREAHNESERKKLEEEINKTATKNRFLQMASLEQQKAGENVLKLAADQKRQKEQLHAKIIQLEKQLNVKQKLELEIQQLKGKLNVMKHMEDDGDDGDLDVLDMMDALHIDLREKEQSLRDMDALNQTLIIKERKSNDELQEARKELISTIKEMPSRGDIRVKRMGELDIRPFLEAMKKKYNEDVAEDRASELCSLWEEYLKDPDWHPFKISIIEGKHQEAIDDEDEKLKELRNEMGEEVYKAVVAALKEINEYNPSGRYITSELWNYAEGKRATLQEGVQVLLKQWKLHRQKRGMI* 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1335 1119 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 231 273 - -
Mal8g1335 1119 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 275 332 - -
Mal8g1335 1119 Coils Coil 798 853 - -
Mal8g1335 1119 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 50 106 - -
Mal8g1335 1119 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 393 450 - -
Mal8g1335 1119 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 117 161 - -
Mal8g1335 1119 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 511 1118 - -
Mal8g1335 1119 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 1 51 - -
Mal8g1335 1119 PANTHER RIBONUCLEASE P SUBUNIT P38 393 450 IPR045177 GO:0080188
Mal8g1335 1119 Pfam XS domain 594 705 IPR005380 GO:0031047
Mal8g1335 1119 Coils Coil 948 968 - -
Mal8g1335 1119 PANTHER RIBONUCLEASE P SUBUNIT P38 50 106 IPR045177 GO:0080188
Mal8g1335 1119 PANTHER RIBONUCLEASE P SUBUNIT P38 231 273 IPR045177 GO:0080188
Mal8g1335 1119 PANTHER RIBONUCLEASE P SUBUNIT P38 275 332 IPR045177 GO:0080188
Mal8g1335 1119 Coils Coil 1037 1057 - -
Mal8g1335 1119 PANTHER RIBONUCLEASE P SUBUNIT P38 511 1118 IPR045177 GO:0080188
Mal8g1335 1119 CDD RRM_like_XS 597 704 IPR005380 GO:0031047
Mal8g1335 1119 Pfam XH domain 985 1115 IPR005379 -
Mal8g1335 1119 PANTHER RIBONUCLEASE P SUBUNIT P38 161 213 IPR045177 GO:0080188
Mal8g1335 1119 PANTHER RIBONUCLEASE P SUBUNIT P38 467 511 IPR045177 GO:0080188
Mal8g1335 1119 Gene3D XS domain 590 759 IPR038588 -
Mal8g1335 1119 PANTHER RIBONUCLEASE P SUBUNIT P38 117 161 IPR045177 GO:0080188
Mal8g1335 1119 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 345 391 - -
Mal8g1335 1119 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 161 213 - -
Mal8g1335 1119 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 467 511 - -
Mal8g1335 1119 Coils Coil 868 912 - -
Mal8g1335 1119 Pfam XS zinc finger domain 505 547 IPR005381 GO:0031047
Mal8g1335 1119 Pfam XS zinc finger domain 268 310 IPR005381 GO:0031047
Mal8g1335 1119 Pfam XS zinc finger domain 386 431 IPR005381 GO:0031047
Mal8g1335 1119 Pfam XS zinc finger domain 155 196 IPR005381 GO:0031047
Mal8g1335 1119 Pfam XS zinc finger domain 44 86 IPR005381 GO:0031047
Mal8g1335 1119 PANTHER RIBONUCLEASE P SUBUNIT P38 1 51 IPR045177 GO:0080188
Mal8g1335 1119 PANTHER RIBONUCLEASE P SUBUNIT P38 345 391 IPR045177 GO:0080188
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1335 Mal-Chr8 25113634 25119224 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1335 - - gmx:100806426 1461.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1335 8 25113634 25119224 Mal8g1335 8 25113634 25119224 ECH
Mal2g2864 2 38020166 38025575 Mal8g1335 8 25113634 25119224 PCT