Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1305 ATGGCTGCCTCAGTCTCAGCTGTTAGAGCTGTCACTGGAACTCCTTTGAGCTTGAATAGCTCTGGAGCAGTAGCTTCAGTTCCAAGTTCATCATTCTTTGGCACCAGCTTAAAGAAGGTTACCTCAAAGCTTCCAAACACAAAGGTTTCATCTGGAAGTTTCAAAATTGTTGCTGCTGAGATCGATGAAAGCAAGCAAACTGACAAAGACAGATGGAGAGGTTTGGCCTATGATACTTCAGATGATCAACAAGACATTACAAGAGGGAAGGGTATGGTTGATTCGGTTTTCCAAGCACCACAAGATGCTGGAACTCATTATGCAGTTATGAGTTCTTATGAGTACCTTAGTACTGGACTTAGACAGTACAACCTTGACAACACCATGGATGGTTTTTACATTGCACCTGCTTTTATGGACAAGCTTGTTGTTCACATCACAAAGAACTTCTTGACTCTACCTAACATCAAGGTTCCTCTCATTCTTGGTATCTGGGGAGGTAAAGGTCAAGGAAAATCTTTTCAAGCTGAGCTTGTATTTGCCAAGATGGGAATCAACCCTATCATGATGAGTGCTGGAGAGCTAGAAAGTGGAAATGCAGGAGAACCAGCAAAACTAATTCGACAAAGATACAGAGAAGCAGCAGACATTATAAGAAAAGGGAAAATGTGTTGTCTATTCATAAATGATCTTGATGCAGGAGCTGGTCGTATGGGTGGAACAACACAGTACACTGTCAACAACCAAATGGTAAATGCAACACTTATGAACATTGCTGATAACCCAACAAATGTTCAACTTCCTGGTATGTATAACAAAGAAGAGAATGCGCGTGTGCCGATCATTGTTACCGGTAATGATTTTTCAACATTGTATGCTCCTCTTATTCGTGACGGTCGTATGGAGAAATTCTACTGGGCACCTACAAGAGATGATCGTATTGGTGTTTGTAAAGGAATTTTTAGACATGATAATGTGCCTGATGAGGATGTTGTTAAGATTGTTGACACTTTCCCTGGTCAATCTATTGATTTCTTTGGTGCACTAAGGGCAAGAGTATATGATGATGAAGTAAGAAAGTGGATTTCTAGTGTTGGTATTGAAACCATTGGGAAGAAGCTTGTGAACTCAAAAGAAGGACCTCCAACTTTTGATCAACCAAAGATGAGTTTGGAGAAGCTGTTGGAGTATGGTAACATGCTTGTCCAAGAACAAGAGAATGTGAAGAGAGTTCAATTGGCAGACAAGTATTTGGAAGGGGCTGCTCTTGGTGATGCTAATCAAGATGCTATCAAGAGTGGATCTTTCTATGGTAAAGCAGCCCAACAAGTAAATATTCCTGTTCCTGAAGGTTGCACGGATCCAAATGCCAAAAACTTCGACCCAACTGCTAGAAGTGATGATGGAACATGCTTATACACATTTGAATAA 1431 0.4074 MAASVSAVRAVTGTPLSLNSSGAVASVPSSSFFGTSLKKVTSKLPNTKVSSGSFKIVAAEIDESKQTDKDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPQDAGTHYAVMSSYEYLSTGLRQYNLDNTMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQAELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFRHDNVPDEDVVKIVDTFPGQSIDFFGALRARVYDDEVRKWISSVGIETIGKKLVNSKEGPPTFDQPKMSLEKLLEYGNMLVQEQENVKRVQLADKYLEGAALGDANQDAIKSGSFYGKAAQQVNIPVPEGCTDPNAKNFDPTARSDDGTCLYTFE* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1305 476 PANTHER ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 475 - -
Mal8g1305 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 340 IPR027417 -
Mal8g1305 476 Gene3D - 309 421 - -
Mal8g1305 476 Pfam ATPase family associated with various cellular activities (AAA) 164 305 IPR003959 GO:0005524|GO:0016887
Mal8g1305 476 PANTHER - 1 475 IPR044960 -
Mal8g1305 476 Gene3D - 124 308 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1305 Mal-Chr8 24288367 24294282 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1305 - - gmx:100806240 860.522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2837 2 37572893 37575962 Mal8g1305 8 24288367 24294282 ECH
Mal8g1305 8 24288367 24294282 Mal8g1305 8 24288367 24294282 ECH