Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1116 ATGTTCAAATGTTTCAACAGAAAATTCTCCTTCTCCGGACAAGAACAAGCACCACCGTCCGATGTTAAGGAAGCTTTTTCCAAATATGCTGATGGTGGATCTTCCATGTCCGCCGATCAGCTACGAAGGTTTTTGCTTGAATATCAACGCGAACCGGACTGCACCGAAGATGATTCGAATAGGATCATTGAAAATGCAATGCAGTCGCGGAAACAGAATCGTGAAAGCAATGGCGGTGTTGGTGATGGTGTTTTATGTACCGGAGAGGGACTCACCCTTGATGAGTTTTTTCGTTTTTTGTTCTTTGATGAATTTAATGTTCCTTTGAAATCACAGGTACACCATGACATGAATGCTCCATTGTCACATTATTTCATATATACAGGACACAATTCCTATCTAACTGGGAATCAGCTAAGCAGTGATTGCAGTGATGTGCCAATCATAAAGGCGTTGCAACGAGGCGTGCGCGTTATAGAACTCGATTTATGGCCAAATTCAGCTAAAGATGACATTGCTGTTGTTCATGGAAGGACACTTACAACTCCTGTCTCACTAGTCCAATGTTTGAAGTCCATAAAAGAATATGCATTTGTTAAATCTCGTTACCCTGTCATTATAACTTTAGAAGATCATCTCACACCAGATCTTCAAGCTAAAGTTGCAGAGATGATAACTCAAATATTTGGAGATATGCTCTATTTTCCACATATAGAACCTATGACAGAATTCCCAACACCGGAATTACTAAAAGATCGAATACTTATATCGACGAAACCACCAAAAGAATATCTTGATTCCAAACAATTTAAGGATACTAGTGACAGTGAAAGGGAAACGGGCGATGAAGGATCATTGTCACCAGCCCTTAGTTTGAATCCTCGTGATAAAAAGCCAGACCAGCAAAGTGCACCACAGTACAAACGTATGATTACAATCCATGCTGGTAAACCAAAGGGTCATATCAGGGACCACCTTAAAATTGCTGGTGATGTTAAGCGTTTGAGCTTGAGTGAGCAGGAACTTGAAAAGGCTTCTGCCTCTTATGGATCTGATATTGTTAGGTTTACACAGAAGAATATTCTCAGGGTGTATCCAAAGGGAACACGTGTCACGTCCTCAAATTACAGGCCACATATAGGGTGGATGTATGGAGCTCAAATGGTCGCATTTAACATGCAGGGGCATGGAAAATCACTGTGGTATATGCAAGGGATGTTTAGAGCAAATGGAGGGTGTGGTTATGTGAAAAAGCCTGATTTTCTTATGGAAAAAGGTCCACAAAATGAGTGTTTTGATCCTAAAAGAACACTGCCTGTAAAGAAGACATTGAAGGTGAAAGTATATATGGGAAATGGGTGGAACTCAGATTTCAGCAAAACACACTTTGATACATTCTCTCCTCCGGACTTTTACACAAAGGTTTGTATTGTTGGAGTACCAGCTGATAAAGTGAATAAGAAGACCAAAGTAAATAAAGATAATTGGTTTCCAATTTGGGATGAAGAGTTTGATTTTCCTTTGAGTGTTCCAGAGCTTGCTTTGCTTAGGATAGAAGTTAGAGAGTATGATAAGCACGAAAAGGATGATTTTGGTGGACAAACATGTTTGCCAGTTCCTGAGCTGAAATCTGGATTCAGAGCTGTTCCTTTATATGATCAAAAGGGTGAGAAATTAAAATCTGTAAAGCTTTTAATGCGGTTTCAGTTCACATGA 1716 0.398 MFKCFNRKFSFSGQEQAPPSDVKEAFSKYADGGSSMSADQLRRFLLEYQREPDCTEDDSNRIIENAMQSRKQNRESNGGVGDGVLCTGEGLTLDEFFRFLFFDEFNVPLKSQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALQRGVRVIELDLWPNSAKDDIAVVHGRTLTTPVSLVQCLKSIKEYAFVKSRYPVIITLEDHLTPDLQAKVAEMITQIFGDMLYFPHIEPMTEFPTPELLKDRILISTKPPKEYLDSKQFKDTSDSERETGDEGSLSPALSLNPRDKKPDQQSAPQYKRMITIHAGKPKGHIRDHLKIAGDVKRLSLSEQELEKASASYGSDIVRFTQKNILRVYPKGTRVTSSNYRPHIGWMYGAQMVAFNMQGHGKSLWYMQGMFRANGGCGYVKKPDFLMEKGPQNECFDPKRTLPVKKTLKVKVYMGNGWNSDFSKTHFDTFSPPDFYTKVCIVGVPADKVNKKTKVNKDNWFPIWDEEFDFPLSVPELALLRIEVREYDKHEKDDFGGQTCLPVPELKSGFRAVPLYDQKGEKLKSVKLLMRFQFT* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1116 571 SMART plcx_3 115 259 IPR000909 -
Mal8g1116 571 Gene3D - 16 111 - -
Mal8g1116 571 Gene3D C2 domain 438 571 IPR035892 -
Mal8g1116 571 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 115 259 - -
Mal8g1116 571 SUPERFAMILY PLC-like phosphodiesterases 115 424 IPR017946 GO:0006629|GO:0008081
Mal8g1116 571 MobiDBLite consensus disorder prediction 265 282 - -
Mal8g1116 571 CDD C2_PLC_like 441 571 - -
Mal8g1116 571 SUPERFAMILY EF-hand 2 117 IPR011992 -
Mal8g1116 571 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 1 570 - -
Mal8g1116 571 MobiDBLite consensus disorder prediction 265 306 - -
Mal8g1116 571 Pfam Phosphoinositide-specific phospholipase C, efhand-like 20 66 IPR015359 -
Mal8g1116 571 CDD PI-PLCc_plant 114 410 - -
Mal8g1116 571 Gene3D Phosphatidylinositol (PI) phosphodiesterase 112 435 IPR017946 GO:0006629|GO:0008081
Mal8g1116 571 ProSiteProfiles C2 domain profile. 424 553 IPR000008 -
Mal8g1116 571 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 443 570 IPR035892 -
Mal8g1116 571 SMART plcy_3 307 423 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mal8g1116 571 Pfam Phosphatidylinositol-specific phospholipase C, X domain 117 259 IPR000909 -
Mal8g1116 571 Pfam C2 domain 443 545 IPR000008 -
Mal8g1116 571 PRINTS Phospholipase C signature 120 138 IPR001192 GO:0035556
Mal8g1116 571 PRINTS Phospholipase C signature 243 260 IPR001192 GO:0035556
Mal8g1116 571 PRINTS Phospholipase C signature 537 547 IPR001192 GO:0035556
Mal8g1116 571 PRINTS Phospholipase C signature 146 166 IPR001192 GO:0035556
Mal8g1116 571 PRINTS Phospholipase C signature 361 382 IPR001192 GO:0035556
Mal8g1116 571 PRINTS Phospholipase C signature 382 400 IPR001192 GO:0035556
Mal8g1116 571 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 336 422 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mal8g1116 571 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 570 IPR001192 GO:0035556
Mal8g1116 571 SMART C2_3c 443 551 IPR000008 -
Mal8g1116 571 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 335 421 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1116 Mal-Chr8 17152474 17156513 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1116 1 570 Acyl Lipid Metabolism Gene Families AT2G40116 59.571 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1116 K05857 - gmx:100777010 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2723 2 35383203 35387190 Mal8g1116 8 17152474 17156513 ECH
Mal8g1116 8 17152474 17156513 Mal8g1116 8 17152474 17156513 ECH
Mal2g2722 2 35371656 35382610 Mal8g1116 8 17152474 17156513 PCT