Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1114 ATGCTACTGAAGATGAAGCACAAGCTATCATTGATAGTTTCAAGCATTTTCATAGAAGGGGTGCACCATGATATGACATTACCCTTGTCTCATTATTTCATATATACTGGTCACAATTCCTATCTAACCGGGAATCAGCTGAGCAGCGACTGCAGTGACGTTCCCATCGTGAACGCATTGAAGAGAGGTGTAAGAGTAATTGAGTTGGACTTATGGCCCAATGCATCCAAGGATGACATCGATGTTCTTCATGGAAGGACATTGACTACTCCTGTGGAGCTAATTAGATGCTTGAGGTCTATTAAGGAACATGCCTTTGTCGCGTCAGAATTTCCGGTTGTATTAACCCTAGAAGACCATCTTACTCCAGATCTTCAAGCTAAAGTGGCTGAGATGGTAACTCAAACATTTGGAGACATACTATTTTGTCCTGGCTCAGAAAGCTTGAAGGAATTTCCTTCTCCAGAATCACTAAAAAAGAGGATTATTATATCAACCAAACCACCTAAGGAGTATCTTGAGGTAAAAGAAGTAAAGGAAAAAGAGGATGAGTCACTGCAAGGAAAGGCTTCAGGCGTTGATGAAGCTTGGGGGAAGGAGGTCCCGAGCTTCAAATGTGGTTCTATATCCGATTACAAGGGAAACAATTTGGATAAAGAAGATTTTCACGACGAGGAAGATCTTTCCGAATCAGACAAGTCACATCACCATGTAGCTCCAGAATATAAAGGTTTAATTGCCATTCATGCTGGGAAGTCAAAAGGAGGAATAGACGCATGGCTCAAAGTAGATCCGGAGAAAGCGAGGCGTATAAGTTTAAGTGAGCAACAGCTTGAAAAGGCTGCTATAACTCATGGAAAAGATATTGTCAGGTTTACTCAGAAGAATATTCTGAGGGTGTTTCCAAAAGGTACTCGCATTGACTCGTCAAATTATAATCCATTAATTGGGTGGATTCATGGAGCTCAAATGGTTGCATTCAACATGCAGGGATATGGGAGATCACTTTGGTTGATGCATGGAATGTTTAGAGCCAATGGAGGCTGTGGTTATGTTAAAAAACCAGATTTTCTCTTAACGACTGGTCCTGACAACGAGGTCTTTGATCCTAAAGCTAAGTTACCTGTGAAGACTACTTTGAAGGTGACTGTATATATGGGAGAAGGATGGTATTATGATTTCAAACATACACACTTTGATCAATATTCACCTCCAGATTTCTATGCAAGAGTTGGGATTGCTGGAGTCCCTTGTGATAGTATAATGAGAAAAACAAGGGCAATAGAGGATAATTGGCTGCCTACATGGAACGAGGTATTTGAGTTCCCGCTTACTGTACCGGAACTAGCTCTTCTTCGTATAGAAGTTCACGAGTATGACATGTCTGAGAAAGACGACTTTGGCGGCCAAACTTGCCTACCTGTTTCGGAGTTAAGAAGCGGCATTCGAGCAGTTTCTCTTCATAGCCAGAAGGGAGATAAATACAACTCTGTAAAGCTTCTTATGCGCTTTGAATTTCATTGA 1524 0.4134 MLLKMKHKLSLIVSSIFIEGVHHDMTLPLSHYFIYTGHNSYLTGNQLSSDCSDVPIVNALKRGVRVIELDLWPNASKDDIDVLHGRTLTTPVELIRCLRSIKEHAFVASEFPVVLTLEDHLTPDLQAKVAEMVTQTFGDILFCPGSESLKEFPSPESLKKRIIISTKPPKEYLEVKEVKEKEDESLQGKASGVDEAWGKEVPSFKCGSISDYKGNNLDKEDFHDEEDLSESDKSHHHVAPEYKGLIAIHAGKSKGGIDAWLKVDPEKARRISLSEQQLEKAAITHGKDIVRFTQKNILRVFPKGTRIDSSNYNPLIGWIHGAQMVAFNMQGYGRSLWLMHGMFRANGGCGYVKKPDFLLTTGPDNEVFDPKAKLPVKTTLKVTVYMGEGWYYDFKHTHFDQYSPPDFYARVGIAGVPCDSIMRKTRAIEDNWLPTWNEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELRSGIRAVSLHSQKGDKYNSVKLLMRFEFH* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1114 507 CDD C2_PLC_like 377 506 - -
Mal8g1114 507 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 270 357 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mal8g1114 507 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 272 358 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mal8g1114 507 Gene3D Phosphatidylinositol (PI) phosphodiesterase 20 372 IPR017946 GO:0006629|GO:0008081
Mal8g1114 507 SMART plcy_3 242 359 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mal8g1114 507 Pfam C2 domain 380 481 IPR000008 -
Mal8g1114 507 CDD PI-PLCc_plant 22 346 - -
Mal8g1114 507 Pfam Phosphatidylinositol-specific phospholipase C, X domain 25 167 IPR000909 -
Mal8g1114 507 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 19 506 IPR001192 GO:0035556
Mal8g1114 507 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 23 167 - -
Mal8g1114 507 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 19 506 - -
Mal8g1114 507 Gene3D C2 domain 374 507 IPR035892 -
Mal8g1114 507 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 379 506 IPR035892 -
Mal8g1114 507 ProSiteProfiles C2 domain profile. 360 489 IPR000008 -
Mal8g1114 507 PRINTS Phospholipase C signature 318 336 IPR001192 GO:0035556
Mal8g1114 507 PRINTS Phospholipase C signature 54 74 IPR001192 GO:0035556
Mal8g1114 507 PRINTS Phospholipase C signature 28 46 IPR001192 GO:0035556
Mal8g1114 507 PRINTS Phospholipase C signature 297 318 IPR001192 GO:0035556
Mal8g1114 507 PRINTS Phospholipase C signature 151 168 IPR001192 GO:0035556
Mal8g1114 507 PRINTS Phospholipase C signature 473 483 IPR001192 GO:0035556
Mal8g1114 507 SMART C2_3c 379 487 IPR000008 -
Mal8g1114 507 SMART plcx_3 23 167 IPR000909 -
Mal8g1114 507 SUPERFAMILY PLC-like phosphodiesterases 23 359 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1114 Mal-Chr8 17114188 17119081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1114 21 506 Acyl Lipid Metabolism Gene Families AT3G55940 68.548 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1114 K05857 - gmx:547864 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2722 2 35371656 35382610 Mal8g1114 8 17114188 17119081 ECH
Mal8g1804 8 36538903 36542694 Mal8g1114 8 17114188 17119081 ECH
Mal8g1114 8 17114188 17119081 Mal8g1114 8 17114188 17119081 ECH
Mal2g2720 2 35358708 35359232 Mal8g1114 8 17114188 17119081 PCT