Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1043 ATGGGAGATCAATTAGCAAGAGCAGAAGATTTTGAGAATAAGGCTGAGAAAAAGCTGAGTGGATGGGGCATGTTTGGTTCCAAATTTGAGGATGCTGCTGATTTCTTTGATAAATCTGCTAATTGTTACAAGCTTGCCAAATCATGGGATAAAGCAGGGTCAACCTACATTAAGTTGGCAAATTGCCATTTGAAGTTGGAAAGCAAGCATGAAGCTGCCTCAGCTTATGTTGATGCTGCACATTGCTATAAAAAAACCAATATGAGTGAGGCTATATCGTGCTTAGATAATGCTGTAAACACTTTCTGCGAAATTGGAAGAATTTCTATGGCTGCTAGATATTTGAAGGAAATTGCTGAATTGTGTGAGTCTGAACAAAATATTGAGAAAGCCCTTGTTTATTATGAAAAATCAGCCGATTTTTATGAAAGCGAGGAAGTGACAACATCTGCAAACCAGTGCAAACAAAAAGTTGCTCAATTTTCTGCTCAGCTTGAACAATATCAGAAATCGATTGAAATTTTTGAAGATATAGCTCGTCAGTCTCTCAACAATAATTTGTTGAAGTATGGAGTTAAAGGACATCTTCTTAATGCTGGGATTTGCCAACTTTGTAAAGGGGACGTCGTTGCTATTACTAATGCATTAGAGCGATATCAGGAATTGGATCCAACATTTTCAGGAACACGTGAATACAGACTTTTGGCGGATGTTGCTGCTGCAATTGATGAAGAAGATGTTGCAAAGTTTACTGAAGTTGTCAAGGAGTTTGATAGCATGTCTCCTTTGGATTCATGGAAAACAACACTTTTTCTGAGGGTTAAGGAAAAACTGAAAGCCAAAGAACTTGAGGAGGATGATCTTACTTGA 870 0.3782 MGDQLARAEDFENKAEKKLSGWGMFGSKFEDAADFFDKSANCYKLAKSWDKAGSTYIKLANCHLKLESKHEAASAYVDAAHCYKKTNMSEAISCLDNAVNTFCEIGRISMAARYLKEIAELCESEQNIEKALVYYEKSADFYESEEVTTSANQCKQKVAQFSAQLEQYQKSIEIFEDIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALERYQELDPTFSGTREYRLLADVAAAIDEEDVAKFTEVVKEFDSMSPLDSWKTTLFLRVKEKLKAKELEEDDLT* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1043 289 CDD SNAP 7 278 IPR000744 GO:0006886
Mal8g1043 289 PANTHER ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 1 289 - -
Mal8g1043 289 Gene3D Tetratricopeptide repeat domain 5 288 IPR011990 GO:0005515
Mal8g1043 289 SUPERFAMILY TPR-like 7 280 IPR011990 GO:0005515
Mal8g1043 289 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 1 289 IPR000744 GO:0006886
Mal8g1043 289 Coils Coil 151 171 - -
Mal8g1043 289 Pfam Soluble NSF attachment protein, SNAP 7 278 - -
Mal8g1043 289 PRINTS NSF attachment protein signature 255 275 IPR000744 GO:0006886
Mal8g1043 289 PRINTS NSF attachment protein signature 28 47 IPR000744 GO:0006886
Mal8g1043 289 PRINTS NSF attachment protein signature 224 244 IPR000744 GO:0006886
Mal8g1043 289 PRINTS NSF attachment protein signature 119 136 IPR000744 GO:0006886
Mal8g1043 289 PRINTS NSF attachment protein signature 152 175 IPR000744 GO:0006886
Mal8g1043 289 PRINTS NSF attachment protein signature 183 202 IPR000744 GO:0006886
Mal8g1043 289 PRINTS NSF attachment protein signature 91 108 IPR000744 GO:0006886
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1043 Mal-Chr8 15810944 15815273 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1043 K15296 - jre:109004758 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2652 2 34065220 34070500 Mal8g1043 8 15810944 15815273 ECH
Mal8g1043 8 15810944 15815273 Mal8g1043 8 15810944 15815273 ECH
Mal2g2652 2 34065220 34070500 Mal8g1043 8 15810944 15815273 PCT