Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0457 ATGGTGTCGTTGTGTGGCCCCACCTGCTTCAAGATTCCGGCGGCGTACTCCGCCACCGCCCCTGCTGCTTTGGGACCATATTCTCAAGCAAATAAAGTCAACAACATTCTTTTTGTCTCTGGTGTTCTTGGTCTTGTTCCTGAGACAGGAAAGTTCTTTTCTGATAATGTTGAAGATCAAACAGAACAGCTTCTCAAAAACATGGGGGAAATCCTTAAAGCCGGTGGTGCCGGCTATTCATCGGTTGTAAAGACAACAATTATGTTGGCTGACTTGAAGGACTTTAAGAAAGTCAATGAGATTTATGCTAAATATTTTCCTTCACCTTTCCCAGCTCGTTCGACTTATCAAGTAGCTGCATTGCCATTGGATGCCAAGATTGAAATCGAGTGCATTGCAACACTATAA 408 0.4363 MVSLCGPTCFKIPAAYSATAPAALGPYSQANKVNNILFVSGVLGLVPETGKFFSDNVEDQTEQLLKNMGEILKAGGAGYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPFPARSTYQVAALPLDAKIEIECIATL* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0457 135 Pfam Endoribonuclease L-PSP 19 134 IPR006175 -
Mal8g0457 135 CDD YjgF_YER057c_UK114_family 27 133 - -
Mal8g0457 135 SUPERFAMILY YjgF-like 16 135 IPR035959 -
Mal8g0457 135 Gene3D - 13 135 IPR035959 -
Mal8g0457 135 TIGRFAM TIGR00004: reactive intermediate/imine deaminase 17 134 IPR006056 -
Mal8g0457 135 ProSitePatterns Uncharacterized protein family UPF0076 signature. 111 129 IPR019897 -
Mal8g0457 135 PANTHER BNAA05G36080D PROTEIN 20 135 - -
Mal8g0457 135 PANTHER 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA 20 135 IPR006175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0457 Mal-Chr8 6931194 6937686 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0457 K09022 - gmx:100500302 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0457 8 6931194 6937686 Mal8g0457 8 6931194 6937686 ECH