Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0428 ATGTTTGGTGTTGTTAGACGAAGGGTTGCTTCTGGAAGCACATCTTCGTTGCTGAAAAGACGTTCTGGTCCTGCTAGAGTTTCTTCCGTTCTGGAAAAAGAGATTGCATTAAGCTCAGGAGGATGTGGGAATATCCGGAATTTCTGTCATATAACACCCGGACGCTGGATTAGTTCAAAACCGATAAGGGACATTTTTCATCAAGATGCTTCCATTCAAACATGGAAGCGTTCATTTTCTTCGGATAATGGAGATAATGTTGATGTTGTTGTCCCTCCATTGGCTGAATCCATCGAGGATGGGACTCTAGCAAAATTTCTGAAGAGGCCTGGTGACAAGGTTACTGTTGATGAACCAATTGCTCAAATTGAAACCGATAAGGTGACAATTGATGTTCCAAGTCCCGAGTCAGGTGTGATTCTGAAGCTTCTAGCCAATGAAGGGGATACTGTTGCACCAGGTAACAAGATAGCAATCATTTCAAGGTCTGCTGATGCTACAACCCACGTTGCGCCATCTGAGACTACACCTGAGAAACCTGCTCCTAAGCCAACCCCAAAGGCTAGTGAGCCAGAGGTGAAGAAAGCTCCTAAAGTTGAAACTACAACAACAGAGAAGCCTAAAGCACCTGCTCCACAAAGCTCTCCTTCTGAGCCACAGCTTCCTCCTAAGGAAAGAGAAAGACGAGTTCCTATGACAAGGCTTCGGAGACGGGTTGCTCAACGGTTGAAGGATTCCCAAAACACATTTGCTATGCTGACAACCTTCAACGAAGTTGATATGACTAATTTGATGAAGCTCCGTGCTGATTATAAGGAGGCTTTTGTTGAAAAGCATGGAGTCAAATTGGGACTTATGTCCGGGTTTATCAAAGCTGCTGTCAATGCACTTCAATATCAACCGATTGTAAATGCAGTCATTGATGGGGATGATATCATATACAGGGATTATATTGATATCAGCATAGCTGTTGGAACTCCAAAGGGACTTGTTGTGCCTGTTATCCGTAATGCTGATACAATGAACTTTGCGGATATAGAAAAACAGATCAATGTTTTTGCAAAGAAGGCTAATGCTGGAACTTTATCAATTGATGAGATGGCTGGAGGCACTCTTACAATATCAAATGGTGGTGTTTATGGCAGCCTTTTGAGTACCCCTATTATCAACCCACCTCAGTCGGCAATCTTGGGTATGCATTCGATTGTGAGCCGTCCAGCGGTTGTTGGTGGAGTTGTTGTTCCAAGGCCATTGATGTACATTGCTCTAACATATGACCATAGAATCATTGATGGAAGAGAGGCAGTGTTCTTTCTGAGACGCATCAAAGATATCGTGGAGGACCCTCGCAGGCTTTTGCTCGACTTATAG 1371 0.4376 MFGVVRRRVASGSTSSLLKRRSGPARVSSVLEKEIALSSGGCGNIRNFCHITPGRWISSKPIRDIFHQDASIQTWKRSFSSDNGDNVDVVVPPLAESIEDGTLAKFLKRPGDKVTVDEPIAQIETDKVTIDVPSPESGVILKLLANEGDTVAPGNKIAIISRSADATTHVAPSETTPEKPAPKPTPKASEPEVKKAPKVETTTTEKPKAPAPQSSPSEPQLPPKERERRVPMTRLRRRVAQRLKDSQNTFAMLTTFNEVDMTNLMKLRADYKEAFVEKHGVKLGLMSGFIKAAVNALQYQPIVNAVIDGDDIIYRDYIDISIAVGTPKGLVVPVIRNADTMNFADIEKQINVFAKKANAGTLSIDEMAGGTLTISNGGVYGSLLSTPIINPPQSAILGMHSIVSRPAVVGGVVVPRPLMYIALTYDHRIIDGREAVFFLRRIKDIVEDPRRLLLDL* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0428 456 ProSiteProfiles Biotinyl/lipoyl domain profile. 86 161 IPR000089 -
Mal8g0428 456 Pfam Biotin-requiring enzyme 88 160 IPR000089 -
Mal8g0428 456 Gene3D - 85 163 - -
Mal8g0428 456 TIGRFAM sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 193 455 IPR006255 GO:0004149|GO:0006099|GO:0045252
Mal8g0428 456 CDD lipoyl_domain 87 160 - -
Mal8g0428 456 SUPERFAMILY CoA-dependent acyltransferases 226 455 - -
Mal8g0428 456 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED 1 456 - -
Mal8g0428 456 MobiDBLite consensus disorder prediction 164 233 - -
Mal8g0428 456 MobiDBLite consensus disorder prediction 188 202 - -
Mal8g0428 456 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX 1, MITOCHONDRIAL-RELATED 1 456 - -
Mal8g0428 456 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 111 140 IPR003016 -
Mal8g0428 456 Gene3D - 211 452 IPR023213 -
Mal8g0428 456 SUPERFAMILY Single hybrid motif 87 177 IPR011053 -
Mal8g0428 456 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 226 454 IPR001078 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0428 Mal-Chr8 6563547 6570626 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0428 57 454 Acyl Lipid Metabolism Gene Families AT1G54220 27.292 1.13e-37 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0428 K00658 - gmx:100799149 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0428 8 6563547 6570626 Mal8g0428 8 6563547 6570626 ECH