Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0389 ATGTTGAAAAGAAAGAAACAAAATATATGGATTATATTTATTATCCAACCAAAACAGTGTCTCTCAGCTGAGGTTGCTGCCATGGAACTCTGTACTCGAACCTTCACCACTACTTCTCTTCTTTTCAACTCTTCTTCTTCTTCTTCAAATTCTCTTCATCTTCTTCATTCCAACACTACTCTTAAACCCTTCAAATTCAACTCCTTCAACCTCTCATCTTCTTTCATTCAACCTTCTCTTTATCATCACACTTCTACTTCTTCTCCCTTCACTGTCTCAGCTTCTCCTTCTCCTTCTTCTTCAGTTGAACTTTTCTCAGAAAATGACGTTCTTCCAGCTGAATTAAAGATCACTCAAACAGAGGAATCCAATTCCAGAGTTAGATTGCATGTGGAGGTGCCATCACGGGTATGTGAGGACTGTTACGAAAGGGTCCTAGCTGAGTTTACGAAGCACGCAAAGGTACCTGGATTTCGTCCTGGAAAAAAGGTCCCGGAAAGTATTCTTGTTGGTTATGTGGGGAGTAAAAATGTTCTGAAGGCTACGATTGAATCAATATTGAGGAGGACACTTTCACACGCTGTAACAGCGGTTACTGGAAGGGCTTTTCAGGATTCTGTACGTATAGTTACTAAATTTTCTGATATGGAGGATACCTATTCTTCTCTCGGATATGTTAGATATGATGTGATTGTTGATGTTGCACCAGAAATCAAATGGATTTCTGATGATGCATACAAAAATTTGAAGGTTGTTGTTGAGATAGACAGTGAAATAGATGCTCACATAGCATCTGAAAAAGAATTTAGAAGGCGTTACAAGTCAGCCGGTGTACTGAAAGTTGTTACTGATAGAGGACTACAGGTTGGTGATGTTGTTGTACTTGACATCTCAGCAACAACCATTGATCAAGATGAATCAAATATCAAAAGTATTCCTTCTGCTGAAAGTAAAGGATTTAATTTTGATACAGAGGATGGTGAAATATTAGTACCAGGTTTCCTTGACTCTATAATTGGAATTGGTCGAGGCGAAACAAAGTCATTTCCCATTCTTTTTCCTGAAACATGGAAGCAGGAAAATCTCCGCGGTGTTCATGCTCAGTTTACTGTCGAGTGCAAAGAACTTTTTTACAGAGATTTGCCAGAGCTGGATGATTCTATTGCTGATAAGCTTATCCCTGGATGTACCACAGTGCAACAGGTGAAAGACTTATTGTTAGAGAGATTCCAAGAGATAGAGCAAACAGCTAGGGAACAAGCGACTGATAATGCTATATTAGATCAGATTTCTAAGATGGTAGAAGTTGATATACCTCGATTCTTGTTTGAGGAACAAGGTAGACAGCTATATGGATCCAGCCTATTAGAAATGCAGACAAAAATTAAACTAACTGAGCAGCAGCTGGCTTCTCTATCAAGTCCAAAGGCCGTGAACGAATATCTTGAGCATCATAAGGAAAATATTACAAATTTGATCAAACAGAACCTGGCAGTTGGTGACATATCTAGGCGTGAAAATATACAGCTTCCTACTGAAGACATCGTCAAAGAGGTTGAGAATTCCATTGCTGAATTCAAACGTCAAAAACAAGAATATGATGAGGAACGTGTAAAGGAACAGGTTCAAGAAGTACTAGAAGGAGCTAAGGTGCTTGAATGGTTGAGAGAACATGCAGAAATTCAGTATATAACAAAATGA 1701 0.3874 MLKRKKQNIWIIFIIQPKQCLSAEVAAMELCTRTFTTTSLLFNSSSSSSNSLHLLHSNTTLKPFKFNSFNLSSSFIQPSLYHHTSTSSPFTVSASPSPSSSVELFSENDVLPAELKITQTEESNSRVRLHVEVPSRVCEDCYERVLAEFTKHAKVPGFRPGKKVPESILVGYVGSKNVLKATIESILRRTLSHAVTAVTGRAFQDSVRIVTKFSDMEDTYSSLGYVRYDVIVDVAPEIKWISDDAYKNLKVVVEIDSEIDAHIASEKEFRRRYKSAGVLKVVTDRGLQVGDVVVLDISATTIDQDESNIKSIPSAESKGFNFDTEDGEILVPGFLDSIIGIGRGETKSFPILFPETWKQENLRGVHAQFTVECKELFYRDLPELDDSIADKLIPGCTTVQQVKDLLLERFQEIEQTAREQATDNAILDQISKMVEVDIPRFLFEEQGRQLYGSSLLEMQTKIKLTEQQLASLSSPKAVNEYLEHHKENITNLIKQNLAVGDISRRENIQLPTEDIVKEVENSIAEFKRQKQEYDEERVKEQVQEVLEGAKVLEWLREHAEIQYITK* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0389 566 Pfam Bacterial trigger factor protein (TF) 116 260 IPR008881 GO:0006457|GO:0015031
Mal8g0389 566 TIGRFAM tig: trigger factor 126 555 IPR005215 GO:0015031
Mal8g0389 566 Gene3D - 113 238 IPR036611 GO:0006457|GO:0015031
Mal8g0389 566 Coils Coil 516 543 - -
Mal8g0389 566 Pfam Bacterial trigger factor protein (TF) C-terminus 398 555 IPR008880 GO:0006457|GO:0015031
Mal8g0389 566 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 99 565 IPR005215 GO:0015031
Mal8g0389 566 Gene3D - 245 561 IPR037041 GO:0006457|GO:0015031
Mal8g0389 566 PANTHER TRIGGER FACTOR-LIKE PROTEIN TIG, CHLOROPLASTIC 99 565 - -
Mal8g0389 566 SUPERFAMILY Trigger factor ribosome-binding domain 115 253 IPR036611 GO:0006457|GO:0015031
Mal8g0389 566 SUPERFAMILY FKBP-like 279 385 - -
Mal8g0389 566 Gene3D - 275 382 IPR046357 GO:0003755
Mal8g0389 566 Hamap Trigger factor [tig]. 115 562 IPR005215 GO:0015031
Mal8g0389 566 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 384 562 IPR027304 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0389 K03545 - gmx:100812597 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0389 8 5480146 5485733 Mal8g0389 8 5480146 5485733 ECH