Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0249 ATGATGAGAGGACGATTCCTCAATTTCTTTATCAATCCAAAACCAAAACAATGGTCCCTTATTTCTCTTAGCCACCACAAATCTCAATCTCATCACTTCATGTCTGTTTCTTCTTCTGTTGATGCTAATTCAAAGAATCTTTTACCTCATGATGATCATTCATGTGGGAAAATCTTCACACCAAGTTCAAGATATGGGGTCATGAACACCTTGCATACAAGTTCAGTTGTGGAACAATCTGAAAAGGATGAGGTTGAAGATTGTGTTTGGATGAAGATGCAAGAAGAAGCTAAAGTTGATGTCACTTTTGAACCAATTTTGTCAAGTTATTATTATGTTTCAATTTTGTCACAGAAATCACTGGAAACTGCTTTGGCTAATCACCTTGCTGTCAAATTAAGCAGTGTAAGTCTTCCTAGTACAACACTTTCTGATCTTTTTGTTGGAATATTGGAATCTGATAAAGAAATTATGTATGCTATGAAAAATGATATAAAAGCTGTTAAGGAAAGAGACCCTGCTTGTATAAGTCATGTTCATTGTTTCTTGAATTTCAAAGGCTTTTTGGCATGTCAAGCTCATAGGGTAGCTCATAATTTGTGGTCAAATGGAAGGAAAGTTTTGGCTGTTATGATTCAGAATCGCGTTTCGGAAGTTTTTGGAGTTGATATTCATCCGGGAGCTAAGATCGGAAGCGGTATTTTGCTGGATCATGCAACTGGGATTGTAGTTGGAGAAACCGCGGTTATTGGGAACGATGTGTCAATTTTGCACGGTGTGACATTGGGAGGAACCGGTAAGGCTCATGGCGATAGACATCCAAAGATTGGTGACGGGGTGCTTATAGGCGCCGGAACTTGTATATTGGGGAATATTAAGATTGGTGATGGTGCTAAAATTGGTGCTTGTTCAGTTGTGATCAAGGAAGTGCCTCCAAGGACTACAGTTGTTGGGAATCCAGCTAAATTAGTTGGAGGGAAGAATAATCCTATTAAACTTGATAAGATTCCTAGTCACACTATGGATCATATTGCACATATTTCTGAGTTTTATGATTATGTGATCTAG 1068 0.382 MMRGRFLNFFINPKPKQWSLISLSHHKSQSHHFMSVSSSVDANSKNLLPHDDHSCGKIFTPSSRYGVMNTLHTSSVVEQSEKDEVEDCVWMKMQEEAKVDVTFEPILSSYYYVSILSQKSLETALANHLAVKLSSVSLPSTTLSDLFVGILESDKEIMYAMKNDIKAVKERDPACISHVHCFLNFKGFLACQAHRVAHNLWSNGRKVLAVMIQNRVSEVFGVDIHPGAKIGSGILLDHATGIVVGETAVIGNDVSILHGVTLGGTGKAHGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGACSVVIKEVPPRTTVVGNPAKLVGGKNNPIKLDKIPSHTMDHIAHISEFYDYVI* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0249 355 SMART SATase_N_2_a 89 193 IPR010493 GO:0005737|GO:0006535|GO:0009001
Mal8g0249 355 PANTHER SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC 66 355 - -
Mal8g0249 355 Gene3D Hexapeptide repeat proteins 223 344 - -
Mal8g0249 355 Pfam Serine acetyltransferase, N-terminal 89 193 IPR010493 GO:0005737|GO:0006535|GO:0009001
Mal8g0249 355 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 282 310 IPR018357 GO:0016740
Mal8g0249 355 Gene3D serine acetyltransferase, domain 1 71 222 IPR042122 -
Mal8g0249 355 SUPERFAMILY Trimeric LpxA-like enzymes 89 325 IPR011004 -
Mal8g0249 355 TIGRFAM cysE: serine O-acetyltransferase 161 322 IPR005881 GO:0005737|GO:0006535|GO:0009001
Mal8g0249 355 Pfam Bacterial transferase hexapeptide (six repeats) 273 307 IPR001451 -
Mal8g0249 355 PANTHER SERINE ACETYLTRANSFERASE 66 355 - -
Mal8g0249 355 CDD LbH_SAT 220 320 IPR045304 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0249 Mal-Chr8 3678672 3679739 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0249 83 354 Miscellaneous Gene Families AT2G17640 53.309 5.80e-92 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0249 K00640 - gmx:100820316 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0249 8 3678672 3679739 Mal8g0249 8 3678672 3679739 ECH
Mal2g3528 2 54406656 54407831 Mal8g0249 8 3678672 3679739 PCT