Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5188 ATGGCTTTCCAATCACTCTTCTCTAAGCATAAGCTCTTATCCTCATACTTTTTCCCTCTTCTCCAACACAAATTCATTCATTCTTTTCCTACCCAACAAATTTCTGCGCCAATATTATTACCTGAACTTGTCAATGAGATATCTCGTATAGTCAGTGATCACCGCCACCCTCACCATGATCTTGAACTCTCACTGACTGCATTTTCAACACATATATCCACTGATTTAGTTGAACAGGTTTTGAAAAGGTGCACTCATCTTGGCTTTTCAGCTCACAGATTCTTTCTTTGGGCTAAATCAATTCAGGGTTTTCAGCATAGTGTTGAAAGCTTCCACATTTTGGTGGAAATCTTAGGAAGATCCAAACAATTTGCTATACTTTGGGATTTTCTTATAGAAATAAGGGAGTCTGATTCTAGTTGTGAAATCACTAACGAAATTTTCTGGATCATTTTCTACGCATATAGCCGAGCTGATTTGCCAGACGGTGCAATTCGTTCTTTCGGTAGAATGGATGAATTTGGAATCAAGCCGAGTATTATTGATGTTGATTTGCTTTTGTACACTCTATGCAAAAAGAAACATGTCAAGCAGGCTCAACAATTTTTTGATCAAGTGAAGAGTCGTTTTTTGTTGACCGCTAAAACTTACAGTATTCTGATTAATGGATGGGGTAAGATTGGTGATTCAGAGAAGGCCCGCGAGCTGTTTGACGCAATGCTTGAGCAAGGATGTTCGGTGGATCTGCTTGCATATAATAATTTGTTAGAGGCCCTTTGCAAAGGAGGTCATGTGGATGAAGCTATGGATTTTTTTAATGATATGTTAGCAAAGAAAGTTGAGCCGGATGCTTTTACTTACTCGATATTCATTCGTTCATATTGCGATGCAAATAATGTGCATTCAGCTTTCCGGGTTCTTGACAAAATGAGAAGATGTAACCTTTTGCCAAATGTGTTTACATACAACTGTATTATAAAGCGGCTTTGTAAGATTAAAAAGGTGGAAGAAGCATATCAATTGTTAGATGAAATGATTTCTAGTGGATTAAAACCAGACACTTGGAGTTATAATGCAATACAAGCTTACCATTGTGATCACTGTGAGGTCAATAGGGCTCTAAAGTTAATATCCAGAATGGAAAAGGACAATTGTCGTCCTGATCGCCATACATATAACATGGTGCTAAAATTACTGATTAGGATAGGAAGGTTTGACAAGGCAACTGAAGTTTGGGAAAGCATGGGGGACAAGAAATTTTATCCTTCTGTTTCGACATATTCCGTCATGATTCATGGTCTTTGTAAGAAGAAGGGGAAGCTAGAGGAGGCATGCAAGTACTTTGAGATGATGATTGATGAAGGAATACCACCTTATGACACTACCATCGAAATGCTAAGGAATCGGCTCTTGGGCTTAGGGCTTTTGGATAACGTTGAAATACTTGCTGCTAAGATGAGGCAGAGTACTTCATGTTCAATCCAAGAATTGGCAAATATTATGATTGGCGCTAGATCTGCTCGAAGTACATCGAAACGTGACGAGTCAGACATAGAAAGTGATTGA 1566 0.3857 MAFQSLFSKHKLLSSYFFPLLQHKFIHSFPTQQISAPILLPELVNEISRIVSDHRHPHHDLELSLTAFSTHISTDLVEQVLKRCTHLGFSAHRFFLWAKSIQGFQHSVESFHILVEILGRSKQFAILWDFLIEIRESDSSCEITNEIFWIIFYAYSRADLPDGAIRSFGRMDEFGIKPSIIDVDLLLYTLCKKKHVKQAQQFFDQVKSRFLLTAKTYSILINGWGKIGDSEKARELFDAMLEQGCSVDLLAYNNLLEALCKGGHVDEAMDFFNDMLAKKVEPDAFTYSIFIRSYCDANNVHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEKDNCRPDRHTYNMVLKLLIRIGRFDKATEVWESMGDKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFEMMIDEGIPPYDTTIEMLRNRLLGLGLLDNVEILAAKMRQSTSCSIQELANIMIGARSARSTSKRDESDIESD* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5188 521 PANTHER RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED 1 520 - -
Mal7g5188 521 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 520 - -
Mal7g5188 521 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 248 282 IPR002885 -
Mal7g5188 521 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 423 458 IPR002885 -
Mal7g5188 521 Gene3D Tetratricopeptide repeat domain 209 277 IPR011990 GO:0005515
Mal7g5188 521 Gene3D Tetratricopeptide repeat domain 278 344 IPR011990 GO:0005515
Mal7g5188 521 Gene3D Tetratricopeptide repeat domain 43 208 IPR011990 GO:0005515
Mal7g5188 521 SUPERFAMILY HCP-like 190 458 - -
Mal7g5188 521 TIGRFAM PPR: pentatricopeptide repeat domain 390 423 IPR002885 -
Mal7g5188 521 TIGRFAM PPR: pentatricopeptide repeat domain 426 458 IPR002885 -
Mal7g5188 521 TIGRFAM PPR: pentatricopeptide repeat domain 251 284 IPR002885 -
Mal7g5188 521 TIGRFAM PPR: pentatricopeptide repeat domain 216 248 IPR002885 -
Mal7g5188 521 TIGRFAM PPR: pentatricopeptide repeat domain 285 319 IPR002885 -
Mal7g5188 521 TIGRFAM PPR: pentatricopeptide repeat domain 320 354 IPR002885 -
Mal7g5188 521 Pfam PPR repeat 216 245 IPR002885 -
Mal7g5188 521 Gene3D Tetratricopeptide repeat domain 345 520 IPR011990 GO:0005515
Mal7g5188 521 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 353 387 IPR002885 -
Mal7g5188 521 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 388 422 IPR002885 -
Mal7g5188 521 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 283 317 IPR002885 -
Mal7g5188 521 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 318 352 IPR002885 -
Mal7g5188 521 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 213 247 IPR002885 -
Mal7g5188 521 Pfam PPR repeat family 317 359 IPR002885 -
Mal7g5188 521 Pfam PPR repeat family 250 295 IPR002885 -
Mal7g5188 521 Pfam PPR repeat family 387 436 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5188 Mal-Chr7 121107877 121109442 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5188 168 466 Miscellaneous Gene Families AT4G11690 27.667 6.71e-39 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5188 - - gmx:100810899 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5188 7 121107877 121109442 Mal7g5188 7 121107877 121109442 ECH