Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5087 ATGGAATTGGAAGTGGATGAGGATCAATTTTATGATACACGTGAAGATTTGTGTTCTGTCTCTGATGAGGATTTTGATTATTGTTTAGAATCTTGTTCTGGTGGTGGTAATAATGAATATGTTACTAGGTTCAATTTTTGGATTAATCACCTTGATAGTGTTCACCATAGACGATTCAATTTTTTAAGATGGATGGGTTTGGAGTATGATGAGAAGAATTCAATTGAGGGAGATGAGTTTGGAGATGATCCATCTTGTGAAGTTGACCGAATAAGATGTGTAGAGGGTTTTCCCTCAACCTCAAATCAGATTGTGTTGGATTCCTTCTCAAATGAGGCTTCTACGTTGATAGAAAATCGCGGTGATGAAACCGAGAGTTTGACGTGTATGATAAAGAATTTGGATGATGGAACAGAGTATGTTGTAGATAAAGTGGATCAAGAGGGAAAACTTAACACCCTTCGTGTTCTGGGTTCGAACCAGTTGATTAGTTTTGAAGAGTTTCATAAAAATATTGGGCCGTCTTCATTTGTTCGGAGACATTTGCAGAGAGATGCTGAAAGTACTAGATTGTTGAGTGTTGCTAAAAAGAAGATGAAGAAAGGTTGGTTAAGCAAACTGGATTCTATTGCTTGTTTTTATCATAATCAAGGGTTTGATGAAACTTGCTGCAACAAAGACTTTGATTCTAGGATTCATAGAATTCGTGTTCATCCGCATAAGAAGCGAGTTAAGGAGCTTTCCTCTCTTTACACTGAACAGGAGTTTAAAGCTCACAAAGGTTTTATTTTGACAATGAAGTTCAGTCTTGATGGAAACTATCTGGCTAGTGGCGGTGAAGATGGCATCGTGCGTGTGTGGAAGGTGGTTGAAGCTGAAAGATCAAATGAATTGAACATTCTAGATAATGATCCATCAAATATATATTTCAAAATGAATCAATTTACTGGTTGTGTAGCTCCCCTTGATGTAGATAAAGAGAAATTGGTTAAAACAGAGAAGTTGAGGAAATCATCTGCTTCAACTTGTGTAATTATCCCACCAAAGACCTTCCGCATATTGGCGAAACCTTTGCATGAATTCCAGGGGCATAGTGATGACATTTTAGACCTTTCATGGTCCAAATCAGGGTTTCTACTGTCTTCCTCTGTCGATAAGACAGCACGCCTATGGCAAGTAGGGATTGACAAATGTCTTCGAGTTTTCTCCCACAATAATTATGTAACATGTGTGAATTTCAATCCTGTCAATGATAATTTTTTCATCAGTGGTTCAATTGATGGAAAGGTGCGCATCTGGGAAGTTGTTCGCTGTCGTGTTGTTGATTACATTGACATCAGAGAGATAGTCACAGCTGTATGCTTCCGCCCTGATGGAAAGGGCACAATTGTAGGTACCATGACGGGCAATTGCCGTTTCTATGATATCCTAGATCATCGTATGAAAATGGATGCTCAATTTTCGTTACAAGGCAAAAAGAAGACATCGGGGAAAAGGATCACTGGCTTTCAGTTTTCGCCCAGTGACCCGACCAAATTATTGGTTGCTTCTGCCGATTCACATGTCTGTATACTCTCTGGAGTTGATGTCATCTATAAATTCAAGGGTCTGAGAAGTGCAGGGCAGATGCATGCTTCCTTCACCTCTGACGGGAAACATATCGTTTCACTTAGTGAAGGTTCAAATGTTTGTATCTGGAATCACACTGGTCAGGATAGGAATTCTTCCAAAGCAAAGAAGATTATGTCTTCAGAGAGTTTTCTATCCCACAATGCAACAATCGCCATACCTTGGTGTGGCATTGAGTCAACGCCGTTGTCTCCTTCACTCGGAGAAGAGTTGATTCAAAGGTCATCTTTGTCTTCTCCCGATTGTTTCTTCATGAGTCGCGGATTTCTTTCCGAGTTAGTCCCAAAGGTTTCTGCAACATGGCCAGAGGAGACGCTTCTCGACTCGGGTCAAACTGTTGTTTCTCCTACAATATGTAAATCAGAGTATAAGTTCTTGAGAAGTGCTTGCAAGGGAATGTCTAATTCTCATTTGTGGGGCCAAGTAATTGTAACAGCAGGATCTGATGGATTCATAAGAGTGTACCAAAATTACGGCTTACCCGTTCGTGTTTGA 2124 0.4002 MELEVDEDQFYDTREDLCSVSDEDFDYCLESCSGGGNNEYVTRFNFWINHLDSVHHRRFNFLRWMGLEYDEKNSIEGDEFGDDPSCEVDRIRCVEGFPSTSNQIVLDSFSNEASTLIENRGDETESLTCMIKNLDDGTEYVVDKVDQEGKLNTLRVLGSNQLISFEEFHKNIGPSSFVRRHLQRDAESTRLLSVAKKKMKKGWLSKLDSIACFYHNQGFDETCCNKDFDSRIHRIRVHPHKKRVKELSSLYTEQEFKAHKGFILTMKFSLDGNYLASGGEDGIVRVWKVVEAERSNELNILDNDPSNIYFKMNQFTGCVAPLDVDKEKLVKTEKLRKSSASTCVIIPPKTFRILAKPLHEFQGHSDDILDLSWSKSGFLLSSSVDKTARLWQVGIDKCLRVFSHNNYVTCVNFNPVNDNFFISGSIDGKVRIWEVVRCRVVDYIDIREIVTAVCFRPDGKGTIVGTMTGNCRFYDILDHRMKMDAQFSLQGKKKTSGKRITGFQFSPSDPTKLLVASADSHVCILSGVDVIYKFKGLRSAGQMHASFTSDGKHIVSLSEGSNVCIWNHTGQDRNSSKAKKIMSSESFLSHNATIAIPWCGIESTPLSPSLGEELIQRSSLSSPDCFFMSRGFLSELVPKVSATWPEETLLDSGQTVVSPTICKSEYKFLRSACKGMSNSHLWGQVIVTAGSDGFIRVYQNYGLPVRV* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5087 707 PRINTS G protein beta WD-40 repeat signature 275 289 IPR020472 -
Mal7g5087 707 PRINTS G protein beta WD-40 repeat signature 379 393 IPR020472 -
Mal7g5087 707 PRINTS G protein beta WD-40 repeat signature 421 435 IPR020472 -
Mal7g5087 707 SMART WD40_4 437 475 IPR001680 GO:0005515
Mal7g5087 707 SMART WD40_4 527 567 IPR001680 GO:0005515
Mal7g5087 707 SMART WD40_4 659 699 IPR001680 GO:0005515
Mal7g5087 707 SMART WD40_4 354 392 IPR001680 GO:0005515
Mal7g5087 707 SMART WD40_4 395 434 IPR001680 GO:0005515
Mal7g5087 707 SMART WD40_4 482 526 IPR001680 GO:0005515
Mal7g5087 707 SMART WD40_4 249 288 IPR001680 GO:0005515
Mal7g5087 707 ProSiteProfiles Trp-Asp (WD) repeats profile. 256 297 IPR001680 GO:0005515
Mal7g5087 707 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 256 289 - -
Mal7g5087 707 SUPERFAMILY WD40 repeat-like 250 698 IPR036322 GO:0005515
Mal7g5087 707 ProSiteProfiles Trp-Asp (WD) repeats profile. 361 401 IPR001680 GO:0005515
Mal7g5087 707 Gene3D - 240 596 IPR015943 GO:0005515
Mal7g5087 707 PANTHER WD REPEAT DOMAIN 44 4 707 IPR040324 -
Mal7g5087 707 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 4 707 - -
Mal7g5087 707 Pfam WD domain, G-beta repeat 397 433 IPR001680 GO:0005515
Mal7g5087 707 Pfam WD domain, G-beta repeat 254 288 IPR001680 GO:0005515
Mal7g5087 707 Pfam WD domain, G-beta repeat 356 391 IPR001680 GO:0005515
Mal7g5087 707 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 361 393 - -
Mal7g5087 707 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 401 435 - -
Mal7g5087 707 ProSiteProfiles Trp-Asp (WD) repeats profile. 401 435 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5087 Mal-Chr7 120003838 120007801 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5087 338 572 Miscellaneous Gene Families AT5G08390 25.670 9.29e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5087 - - gmx:100788374 1106.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5087 7 120003838 120007801 Mal7g5087 7 120003838 120007801 ECH