Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5086 ATGCTGGAAACGGTTAAATACCTGATCGGAACGGCTGGTCCAAGCGGTTTTGGATCTAAATCCACCGCCGAACAAGTCACTGAAACCTGCGGCGATCTCCGCTCCATCACCGCCATCATAACAGGTGGTACGTCAGGAATCGGAGCGGAAACGGCGCGTGTGTTGGCGAAGAGAGGGGCGAGGGTGATTCTTCCCGCGCGTAGCATGAAAAATGCGGAAGAAACTAGAGGTAGAATCGCAACGGAGTTTCCTGCGGCGGAGATTATTGTTATGGCACTCGATCTCAGTTCTCTCAATTCTGTTACAAATTTCGTTTCTCGCTTTCACTCCCTCGGTTTCCCTCTCAACCTCCTCATAAACAATGCAGGAAAGTTTGCAGAAGAGCACGCAATCTCCGAGGATGGAGTTGAAATGACCTTCGCTACTAATTTTCTAGGTCATTTTCTGTTAACAAAATTGTTGATGAAGACGATGGTTGAAACGGCAAAGGAGACAGGGATACAAGGAAGGATAGTGAACGTGTCGTCTGCTATACACGATTGGTTTACTGGCGACGTCATCTCCTATTTGGCTCTTATAAGCCGCAGAAAAAGCCAGTACGACGCCACACGTGCTTATGCTCTTTCCAAACTAGCCAACGTTTTCCACACTAACGAGCTTGCTCGCAGACTCAAGCAAATGGATGCCAACGTGACTGTGAACTGCGTTCATCCGGGGGTCGTGAGAACCAGACTCACCAGAGAGCGTGAAGGCTTTCTTACAGATTTAGTTTTCTTTTTGGCTTCCAAGCTCTTAAAGACCGTTCCCCAGGCAGCTGCAACAACATGTTATGTGGCAACCCACCCAAGGCTCTTGAATGTGTCTGGCAAGTACTTTGCTGACTGCAACGAAACCTCAACTTCCAAATTGGGATCCAACATAATTGAAGCTTCTAGGTTATGGGCCGTTTCCGAATTAATGATTTCTAAGGGTCCAAAAGCTGCCTTTGACCTAATTAATCACCTTGAATTTTGA 1014 0.4734 MLETVKYLIGTAGPSGFGSKSTAEQVTETCGDLRSITAIITGGTSGIGAETARVLAKRGARVILPARSMKNAEETRGRIATEFPAAEIIVMALDLSSLNSVTNFVSRFHSLGFPLNLLINNAGKFAEEHAISEDGVEMTFATNFLGHFLLTKLLMKTMVETAKETGIQGRIVNVSSAIHDWFTGDVISYLALISRRKSQYDATRAYALSKLANVFHTNELARRLKQMDANVTVNCVHPGVVRTRLTREREGFLTDLVFFLASKLLKTVPQAAATTCYVATHPRLLNVSGKYFADCNETSTSKLGSNIIEASRLWAVSELMISKGPKAAFDLINHLEF* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5086 337 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 177 IPR002347 -
Mal7g5086 337 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 113 124 IPR002347 -
Mal7g5086 337 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 206 225 IPR002347 -
Mal7g5086 337 Pfam short chain dehydrogenase 37 249 IPR002347 -
Mal7g5086 337 PANTHER MITOCHONDRIAL PYRUVATE CARRIER 4 326 - -
Mal7g5086 337 Gene3D - 22 324 - -
Mal7g5086 337 PRINTS Glucose/ribitol dehydrogenase family signature 163 179 IPR002347 -
Mal7g5086 337 PRINTS Glucose/ribitol dehydrogenase family signature 206 225 IPR002347 -
Mal7g5086 337 PRINTS Glucose/ribitol dehydrogenase family signature 113 124 IPR002347 -
Mal7g5086 337 PRINTS Glucose/ribitol dehydrogenase family signature 229 246 IPR002347 -
Mal7g5086 337 PRINTS Glucose/ribitol dehydrogenase family signature 37 54 IPR002347 -
Mal7g5086 337 CDD retinol-DH_like_SDR_c_like 37 314 - -
Mal7g5086 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 37 299 IPR036291 -
Mal7g5086 337 PANTHER RETINOL DEHYDROGENASE 4 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5086 Mal-Chr7 119994431 119999356 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5086 21 292 Acyl Lipid Metabolism Gene Families AT1G24360 25.088 2.06e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5086 - - gmx:100794347 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5086 7 119994431 119999356 Mal7g5086 7 119994431 119999356 ECH