Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5056 ATGAGCTGTTTTTGCTTGATGAAAGGCAAACCAAAAACTAAGAAAGAACAATCCTCCATTCTTGCCTTGGAGACATCCTTTACTGTGAATGAGGTTGAGGCTTTACTTGGCTTGTTTAAGAAACTAAGTAGTTCAATTATTGATGATGGCTGCATTCACAAGGAGGAGTTCCAACTTGCACTTTTCAGAAATAGGAGCAAGCAGAATCTACTTGCAAGCAGGGTATTTGATATGTTTGATATTAAACGTAATGGAGTAATTGAATTTGGAGAATTTGTTCGCTCACTAAGCATCTTTCATCCAAAGACATCTGAAGAGAAGAAAATAGAATTTGCATTTAAATTGTATGACCTTGGAAAGACCGGATACATTGAGCATAGTGAGTTGAAGGAGATGGTTTTGGCTACTTTGACTGAATCAGAAGTTATAGTTTCAGAAGATGTTGTTGAATCCATTGTGGAAAAGACAATGAAGGAGGTTGACTCAAAAGGAGATGGGAAGATTGATATGGAAGAATGGAAAAATTATGCAGCAAAAAATCCTTCTCTTCTTAAGATCATGACTCTGCCATATCTAAAGGATATAACTATGGCATTTCCCAGCTTTGTTTTGCACACCGAGGTTGAAGACTAG 633 0.3697 MSCFCLMKGKPKTKKEQSSILALETSFTVNEVEALLGLFKKLSSSIIDDGCIHKEEFQLALFRNRSKQNLLASRVFDMFDIKRNGVIEFGEFVRSLSIFHPKTSEEKKIEFAFKLYDLGKTGYIEHSELKEMVLATLTESEVIVSEDVVESIVEKTMKEVDSKGDGKIDMEEWKNYAAKNPSLLKIMTLPYLKDITMAFPSFVLHTEVED* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5056 210 SMART efh_1 152 180 IPR002048 GO:0005509
Mal7g5056 210 SMART efh_1 108 136 IPR002048 GO:0005509
Mal7g5056 210 SMART efh_1 71 99 IPR002048 GO:0005509
Mal7g5056 210 PANTHER CALCINEURIN B-LIKE PROTEIN 8 1 209 - -
Mal7g5056 210 Gene3D - 18 210 - -
Mal7g5056 210 PRINTS Recoverin family signature 75 96 - -
Mal7g5056 210 PRINTS Recoverin family signature 13 27 - -
Mal7g5056 210 PRINTS Recoverin family signature 122 140 - -
Mal7g5056 210 PRINTS Recoverin family signature 168 188 - -
Mal7g5056 210 ProSiteProfiles EF-hand calcium-binding domain profile. 148 183 IPR002048 GO:0005509
Mal7g5056 210 ProSiteProfiles EF-hand calcium-binding domain profile. 104 139 IPR002048 GO:0005509
Mal7g5056 210 ProSiteProfiles EF-hand calcium-binding domain profile. 67 102 IPR002048 GO:0005509
Mal7g5056 210 Pfam EF-hand domain pair 49 94 IPR002048 GO:0005509
Mal7g5056 210 CDD EFh 108 173 IPR002048 GO:0005509
Mal7g5056 210 Pfam EF-hand domain pair 106 173 IPR002048 GO:0005509
Mal7g5056 210 SUPERFAMILY EF-hand 21 203 IPR011992 -
Mal7g5056 210 PANTHER CALCINEURIN B 1 209 IPR045198 GO:0005509|GO:0019722|GO:0019900
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5056 Mal-Chr7 119703518 119706215 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5056 25 210 EF-hand Containing Proteins AT5G24270 65.591 2.02e-87 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5056 K06268 - nnu:104604792 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5056 7 119703518 119706215 Mal7g5056 7 119703518 119706215 ECH