Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5055 ATGTTTCAACTTCACCAGTCATGGACTTTGAAAAAATTGATCACTCCATGTGCATGGAACAAATTCCAGCACAAAGTGGTGGATGCAAATGAGCATCAAACAACTTGTGTGGATACTGCTACACTAATTCTATATGGCATATGTTCTTCTTGTCAAATCGCTACTTTAGATTTCCATTCTTGGGAAACATTATTACCTAAACAAGTCTTTTTGATGGGGTGTTCTTGCACCAAACCGCGACTTCGGCGTGAAGATCCAGCAATTCTTGCTGAACAAACTTATTTTAATATTTCTGAAGTTGAAGCATTACATGATCTCTTCAAGAAATTAAGCAGCTCTATGGTCAATGATGGGCTAATTAGCAAAGAAGAGTTTCAGCTTGGCTTATTTGGAAGCAGCAAGAAACAGAACCTCTTTGGCGACAGGGTGTTCAATATATTTGACTCAAAAAATGATGGTGTGATAGATTTTGGAGAGTTTGTTAAAGCTTTAAGTGTCTTCCATCCAACAGCACCTCAACCACAAAAGGCAGCTTTTGCATTTCGACTCTATGATATATGGCAAAGAGGCTTTATTGAACGAGATGAGGTAAAAGAGATGATAATGGCACTCCTAAAAGAGTCTGAGTTGGTTCTTTCTCATGATATAATTGAGGTCATAATTGATAAGGCCTTTCAAGAAGCTGATTTAAAAGGAGATGGAATGATTGATGAAGAGGAATGGGAAAATTTTGTTGCTCGAAATCCATCCTTACTGAGGAATATGACAATACCATATTTGAAGTAA 786 0.3728 MFQLHQSWTLKKLITPCAWNKFQHKVVDANEHQTTCVDTATLILYGICSSCQIATLDFHSWETLLPKQVFLMGCSCTKPRLRREDPAILAEQTYFNISEVEALHDLFKKLSSSMVNDGLISKEEFQLGLFGSSKKQNLFGDRVFNIFDSKNDGVIDFGEFVKALSVFHPTAPQPQKAAFAFRLYDIWQRGFIERDEVKEMIMALLKESELVLSHDIIEVIIDKAFQEADLKGDGMIDEEEWENFVARNPSLLRNMTIPYLK* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5055 261 ProSiteProfiles EF-hand calcium-binding domain profile. 141 170 IPR002048 GO:0005509
Mal7g5055 261 SUPERFAMILY EF-hand 87 259 IPR011992 -
Mal7g5055 261 Gene3D - 85 261 - -
Mal7g5055 261 ProSiteProfiles EF-hand calcium-binding domain profile. 216 251 IPR002048 GO:0005509
Mal7g5055 261 PANTHER CALCINEURIN B 72 261 IPR045198 GO:0005509|GO:0019722|GO:0019900
Mal7g5055 261 CDD EFh 176 241 IPR002048 GO:0005509
Mal7g5055 261 ProSiteProfiles EF-hand calcium-binding domain profile. 172 207 IPR002048 GO:0005509
Mal7g5055 261 SMART efh_1 220 248 IPR002048 GO:0005509
Mal7g5055 261 SMART efh_1 139 167 IPR002048 GO:0005509
Mal7g5055 261 SMART efh_1 176 204 IPR002048 GO:0005509
Mal7g5055 261 Pfam EF hand 221 245 IPR002048 GO:0005509
Mal7g5055 261 Pfam EF hand 141 161 IPR002048 GO:0005509
Mal7g5055 261 PANTHER CALCINEURIN B-LIKE PROTEIN 5 72 261 - -
Mal7g5055 261 PRINTS Recoverin family signature 143 164 - -
Mal7g5055 261 PRINTS Recoverin family signature 81 95 - -
Mal7g5055 261 PRINTS Recoverin family signature 190 208 - -
Mal7g5055 261 PRINTS Recoverin family signature 236 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5055 Mal-Chr7 119701677 119703132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5055 93 261 EF-hand Containing Proteins AT5G24270 63.314 1.32e-77 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5055 K06268 - gmx:100808628 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5055 7 119701677 119703132 Mal7g5055 7 119701677 119703132 ECH