Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4977 ATGGGACTTATGAGCATGAACCAACCTCAATTGCTGTCTAAGATAGCCACTGGTGATGGACATGGTGAAACATCATCTTACTTTGATGGATGGAAAGCTTATGATAAAGACCCTTTTCATCCAACCAAAAATCCTCATGGTGTTATCCAAATGGGTCTTGCAGAAAATCAGCTTACTGCTGATTTAGTTCAAAATTGGATAATGAGTAACCCAGAAGCCTCAATTTGTACTCTAGAAGGAGTACATAATTTCAAAGAAATGGCTAATTTTCAGGATTATCATGGTCTACCAGAGTTCAGAAATGCTGTGGCTAAATTCATGTCTAGAACAAGAGGAAACAAAGTGACATTTGATCCTGATCGTATTGTCATGAGTGGTGGAGCAACTGGAGCACATGAGGCTACTGCTTTTTGTTTGGCAGATCCTGGTGATGCTTTTTTGGTTCCTACACCTTATTATCCAGGTTTCGATAGAGATTTGAGGTGGAGAACAGGAGTGAAACTTGTTCCAGTTATCTGTGAAAGCTCAAACAATTTCAAATTAACAAAACAAGCCTTAGAAGAAGCCTATGAAAAAGCCAAAAAAGACAGCATCAGAATCAAAGGTTTACTCATAACAAATCCATCAAATCCATTAGGCTCAGTTATGGACAAAACCACATTAAGGACTGTTGTAAATTTCATCAACGAAAAGCGTATTCACCTAATAAGTGATGAAATATACGCTGCAACGGTTTTTAGCCAGCCAAGTTTCATAAGCATAGCTGAAATAATTGAAGACAAAGACATTGAATGTGATCGTAACCTCGTTCACATAGTTTATAGTCTTTCAAAAGACATGGGATTCCCCGGTTTCAGAGTTGGTATAATATACTCTTACAATGATACCGTTGTGAACTGTGCGCGCAAAATGTCGAGTTTTGGATTAGTTTCAACACAGACACAATATTTGATGGCGAAAATGCTATCTGATGATGAATTTGTTGAAAAGTTTCTTGCTGAAAGTGCAAAAAGGTTAGCACAAAGGTACAGAATTTTCACTAGTGGATTAATCAAAGTTGGAATTAATTGTTTACAAAGTAATGGTGGACTTTTTGTGTGGATGGATTTGAGAGGACTTCTTAAGGAAGCTACATTTGAATCAGAATTGGAACTTTGGAGAGTGATTATTCATGAAGTGAAGATTAATGTTTCACCTGGTGTTTCATTTCATTGTTCTGAGCCAGGGTGGTTTAGAGTGTGTTATGCTAACATGGATGATAGAGATGTGCAAATTGCTTTACAAAGGATTAGATCATTTGTGGTTCAGAATAATAAGGAGGTTATGGTGTCTGATAAGAAGAACACTAAACCTTGTTGGCATAGTAATTTGAGGTTAAGCCTTAAAACAAGAAGATTTGATGATACTATAATGTCACCTCATTCTCCATTTCCTCAATCACCTCTTGTTAAAGCCACTACTTGA 1464 0.3689 MGLMSMNQPQLLSKIATGDGHGETSSYFDGWKAYDKDPFHPTKNPHGVIQMGLAENQLTADLVQNWIMSNPEASICTLEGVHNFKEMANFQDYHGLPEFRNAVAKFMSRTRGNKVTFDPDRIVMSGGATGAHEATAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVKLVPVICESSNNFKLTKQALEEAYEKAKKDSIRIKGLLITNPSNPLGSVMDKTTLRTVVNFINEKRIHLISDEIYAATVFSQPSFISIAEIIEDKDIECDRNLVHIVYSLSKDMGFPGFRVGIIYSYNDTVVNCARKMSSFGLVSTQTQYLMAKMLSDDEFVEKFLAESAKRLAQRYRIFTSGLIKVGINCLQSNGGLFVWMDLRGLLKEATFESELELWRVIIHEVKINVSPGVSFHCSEPGWFRVCYANMDDRDVQIALQRIRSFVVQNNKEVMVSDKKNTKPCWHSNLRLSLKTRRFDDTIMSPHSPFPQSPLVKATT* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4977 487 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 1 445 - -
Mal7g4977 487 Coils Coil 176 196 - -
Mal7g4977 487 Gene3D Aspartate Aminotransferase, domain 1 37 429 IPR015422 GO:0003824
Mal7g4977 487 Pfam Aminotransferase class I and II 49 430 IPR004839 GO:0009058|GO:0030170
Mal7g4977 487 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 197 221 - -
Mal7g4977 487 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 51 77 - -
Mal7g4977 487 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 269 293 - -
Mal7g4977 487 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 121 141 - -
Mal7g4977 487 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 84 100 - -
Mal7g4977 487 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 143 164 - -
Mal7g4977 487 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 233 256 - -
Mal7g4977 487 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 301 324 - -
Mal7g4977 487 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 275 288 IPR004838 GO:0003824|GO:0009058|GO:0030170
Mal7g4977 487 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 6 1 445 - -
Mal7g4977 487 SUPERFAMILY PLP-dependent transferases 22 434 IPR015424 -
Mal7g4977 487 Gene3D - 71 324 IPR015421 GO:0003824
Mal7g4977 487 CDD AAT_like 89 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4977 Mal-Chr7 118700911 118703226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4977 K20772 - gmx:100037458 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4977 7 118700911 118703226 Mal7g4977 7 118700911 118703226 ECH