Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4933 ATGTGGTTTCTTGGTTGGAAAGGACCATCGGGTTTCTCAGCTTCATCAACTGCTGATCATGTCACTCTTGGAATTGATGGAACCTCTCTCACTGCTATCATCACAGGAGCATCAAGTGGTCTTGGTCTGGAAACAACCAGGATTCTTGCTATGCGTGGTGTTCATGTTGTTATGGCAGTTAGGAATGTGAAAAATGGTTTGAATATCAAAGAAACATTAATTAAGGAAATTCCTGATGCTAAAATTGATGTTTTTGAGTTAGATCTTAGCTCTTTGGCATCTGTTAGGAAATTTGTTGCAGATTTTAATTCCTCTGGTCTTCCACTTAATATTCTAATTAACAATGCAGGACTGATGGCTACTCCATTCATGCTTTCTCAAGACAACATTGAATTGCAGTTTGCAACCAATCATTTAGGCCATTTTCTGTTGACAAACCTTTTATTAGAGACTATGAAAAAAACTGTAAGGGAATGCAACCGGGAAGGAAGGATAGTTATTGTATCATCAGAGGCTCACAGATTTGCATATAGTGAAGGGATTCGTTTCGATAAGATCAACAATGAATCAGAATACAGCAGTTATTTTGCTTATGGACAATCCAAGCTTGCAAATATTTTGCATGCCAATGAGCTTGCAAGGCGCTTGAAGGAAGAAGGAGTGCAAATAACTGTTAACTCCCTTCATCCTGGTACAATTGTGACAAATATTCTGCGGCACCATGGTTATTTTAATGCTGTTGCTAACATGGTGGGCAAGTACTTCCTTAAAAATGTGCAGCAGGGAGCTGCAACTCAATGTTACCTTGCATTGCATCCACAGGTCAAGGGAATATCTGGTGAATACTTTATGGATAGCAATAAGGCAAACCCAACTTCTTTAGCCAAAGATGCAAAGCTGGGACAAAAACTGTGGGAATTAAGTGTTAGTTTGTCTAATACAAAGTAG 948 0.3892 MWFLGWKGPSGFSASSTADHVTLGIDGTSLTAIITGASSGLGLETTRILAMRGVHVVMAVRNVKNGLNIKETLIKEIPDAKIDVFELDLSSLASVRKFVADFNSSGLPLNILINNAGLMATPFMLSQDNIELQFATNHLGHFLLTNLLLETMKKTVRECNREGRIVIVSSEAHRFAYSEGIRFDKINNESEYSSYFAYGQSKLANILHANELARRLKEEGVQITVNSLHPGTIVTNILRHHGYFNAVANMVGKYFLKNVQQGAATQCYLALHPQVKGISGEYFMDSNKANPTSLAKDAKLGQKLWELSVSLSNTK* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4933 315 CDD retinol-DH_like_SDR_c_like 31 305 - -
Mal7g4933 315 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 31 287 IPR036291 -
Mal7g4933 315 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 2 311 - -
Mal7g4933 315 Gene3D - 26 315 - -
Mal7g4933 315 Pfam short chain dehydrogenase 31 177 IPR002347 -
Mal7g4933 315 PRINTS Glucose/ribitol dehydrogenase family signature 221 238 IPR002347 -
Mal7g4933 315 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
Mal7g4933 315 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Mal7g4933 315 PRINTS Glucose/ribitol dehydrogenase family signature 198 217 IPR002347 -
Mal7g4933 315 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Mal7g4933 315 PANTHER RETINOL DEHYDROGENASE 2 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4933 Mal-Chr7 118089499 118092784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4933 33 291 Acyl Lipid Metabolism Gene Families AT3G55290 28.676 3.03e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4933 - K19329 gmx:100785176 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4933 7 118089499 118092784 Mal7g4933 7 118089499 118092784 ECH