Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4888 ATGTCTAGTAACGATGGTTATTCTCGAAAGAGCGGTTCATTCTCGACTAGCCCTACGAGGTCAAGGAAGAAGACACCAGAGTATTCACCACCTCCTAAACCATTTCCTCCTATGCGCACCACCATGGGAGAGCGAACTGTGAAATCATTGCGACTTTCAAAGGCTTTGACAGTGCCTGAAACAACAACTATTTATGAAGCTTGTCGTCGGATGGCTGCTCGTAGAGTAGATGCTCTCTTACTAACTGATTCTAATGCTTTGCTTTGTGGAATCCTCACAGACAAGGATATAGCAACAAGAGTTATTGCATGTGACATTAATCTTGAAGACACACATTGTTCCAAGGTTATGACAAGGAATCCAGTATTCGTCCTTACAGACACTCTTGCTGTTGAAGCTCTCCAAAAGATGGTGCAAGGGAGATTTCGACATTTACCTGTGGTGGAGAATGGAGAAGTGGTTGCTATCCTCGACATAGCCAAGTGTTTATATGATGCCATTGCTCGTATGGAAAGGGCAGCTGAGAAAGGAAAAGCAATTGCAGCAGCTGTTGAAGGTATCGACAAACACTGGGGAGCATCTGCCTCTGGATCCAATTCATCATTCATTGAGACTCTTCGGGAGCAAATATTTAAGCCATCATTGTCTACAATCATTCCTGAGAATTCAAAGGTTGTTACAGTTTCACCAACAGATTCAGTTTTGACAACAACAAAAATGATGCTTGAACTTCGTGCAAGTGCTGCTATTGTGATAGTTGATAACAAACCTTGTGGTATCCTTACTTCAAAGGATATCTTGATGCGGGTTATTGCACAAAATCTCTCGGCATCGTCAACTCTTGTTGAGACGGTCATGACTGCAAATCCAGAATGTGCAATAATTGATACACCAATTGTTGATGCACTTCACATAATGCATAATGGAAAATTCTTGCATCTTCCTGTGGTGGATAGAGATGGCGTTGTTGTTGCCACGGTTGATGTGATTAATATCACTCATGCTGCTGTGGCCACAGCTAGTCAGGTTGGAAATACTACTAATATGAACAATGAAGCTGCCAACTCCATGATACAAAAGTTCTGGGATTCGGCCATGGCCTTAACTTCAAATGACGAAGAAGAAGATTCACAAAGTGACACTTCCTTGAAAATGATTTCTGAGGGAGGAGAAATAAGGAGATCAATTTCTTATAACGCGTCAAGCGTGCAAACTACGTTTTCCTTCAAACTACAAGACAAGAAGGGTAGATTACACAGATTCACATGTGATACTCGGAGCTTGACAGAGGTTATAACTTCCATCATTCAAAGAGTTGGCGATGATATTGACCCCAATAACTTGCCTCACATTTTGTATGAAGATGAAGAACACGATAAAGTTGTATTGGCTTCAGATAGTGATCTTGCTGCAGCCGTGGACCATGCAAAGACAGCTGGTTTGAAGGGATTGAGATTGCACTTGGACTACTCAGGAACACGTAGTTACGAAACAGAAACAAGTTTAGGTTTGGAATATGCTGATTCAGAAGCATGGGCCGCGGCCTATCATACCATTGCAGCTGGAGCTGCAATTGTTGCTGCTTTAGGTCTATTAGCGTTCTTCAGGCGAAGGCCATGA 1620 0.4241 MSSNDGYSRKSGSFSTSPTRSRKKTPEYSPPPKPFPPMRTTMGERTVKSLRLSKALTVPETTTIYEACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIACDINLEDTHCSKVMTRNPVFVLTDTLAVEALQKMVQGRFRHLPVVENGEVVAILDIAKCLYDAIARMERAAEKGKAIAAAVEGIDKHWGASASGSNSSFIETLREQIFKPSLSTIIPENSKVVTVSPTDSVLTTTKMMLELRASAAIVIVDNKPCGILTSKDILMRVIAQNLSASSTLVETVMTANPECAIIDTPIVDALHIMHNGKFLHLPVVDRDGVVVATVDVINITHAAVATASQVGNTTNMNNEAANSMIQKFWDSAMALTSNDEEEDSQSDTSLKMISEGGEIRRSISYNASSVQTTFSFKLQDKKGRLHRFTCDTRSLTEVITSIIQRVGDDIDPNNLPHILYEDEEHDKVVLASDSDLAAAVDHAKTAGLKGLRLHLDYSGTRSYETETSLGLEYADSEAWAAAYHTIAAGAAIVAALGLLAFFRRRP* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4888 539 MobiDBLite consensus disorder prediction 1 42 - -
Mal7g4888 539 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSCBSPB4-RELATED 38 526 IPR034896 -
Mal7g4888 539 SMART PB1_new 406 491 IPR000270 GO:0005515
Mal7g4888 539 CDD PB1_MUG70 407 491 - -
Mal7g4888 539 ProSiteProfiles CBS domain profile. 117 175 IPR000644 -
Mal7g4888 539 ProSiteProfiles PB1 domain profile. 404 491 IPR000270 GO:0005515
Mal7g4888 539 Pfam CBS domain 222 268 IPR000644 -
Mal7g4888 539 Pfam CBS domain 282 326 IPR000644 -
Mal7g4888 539 Pfam CBS domain 115 157 IPR000644 -
Mal7g4888 539 Pfam CBS domain 53 99 IPR000644 -
Mal7g4888 539 SUPERFAMILY CAD & PB1 domains 401 493 - -
Mal7g4888 539 Pfam PB1 domain 406 489 IPR000270 GO:0005515
Mal7g4888 539 SMART cbs_1 224 271 IPR000644 -
Mal7g4888 539 SMART cbs_1 120 164 IPR000644 -
Mal7g4888 539 SMART cbs_1 289 337 IPR000644 -
Mal7g4888 539 SMART cbs_1 54 102 IPR000644 -
Mal7g4888 539 MobiDBLite consensus disorder prediction 1 24 - -
Mal7g4888 539 SUPERFAMILY CBS-domain pair 223 335 IPR046342 -
Mal7g4888 539 Gene3D - 37 182 IPR046342 -
Mal7g4888 539 Gene3D - 194 349 IPR046342 -
Mal7g4888 539 CDD CBS_pair_MUG70_1 52 168 - -
Mal7g4888 539 ProSiteProfiles CBS domain profile. 218 278 IPR000644 -
Mal7g4888 539 CDD CBS_pair_MUG70_2 222 338 - -
Mal7g4888 539 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 38 526 - -
Mal7g4888 539 SUPERFAMILY CBS-domain pair 44 160 IPR046342 -
Mal7g4888 539 ProSiteProfiles CBS domain profile. 51 111 IPR000644 -
Mal7g4888 539 ProSiteProfiles CBS domain profile. 286 343 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4888 Mal-Chr7 117479774 117484784 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4888 - - gmx:100783514 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4888 7 117479774 117484784 Mal7g4888 7 117479774 117484784 ECH
Mal2g1335 2 16069361 16077114 Mal7g4888 7 117479774 117484784 PCT