Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4878 ATGGACCTTATTCATAATATCCTGAACATAGTAGCTCCTCCATTCACCTTCTTTTCCTTACTCCTTTTCTTACCACCGTATTGGACCTTCAAGTTTTTACTTTCTACAATATATACAATATTCTTCAGTGAAAATGTTGCTGGTAAAGTTCATTTGGCTTACGAGTATGCTAAGAGAGGTGCTCGATTAGCACTTTCTGCTAGAAGAGAGACAGCATTGCGTGAAGTTGCTGATAGAGCTCGTGATTTTGGTTCTCCAGATGTTATTATAATGCGTGCAGATGTTTCTAAAGTTGATGATTGTAGGCGTTTGGTCGATCAAACCGTTCATCATTTTGGTAGACTGGATCATTTGGTAAACAATGCTGCAATCAGTGCTGCCATGATGTTTGAAGACGTAACTGATATCACCAATTTCAGACCTGTCATGGAGACAAACTTTTGGGGATCAGTTTACACAACACGTTTTGCTTTACCACACCTCAGAAACAGCAGAGGCAAAATTGTTGTCCTTTCATCAATTGATTCTTGGATGCCTGCACCCAGAAGGAGTATCTATAATGCAAGCAAAGCAGCATTAGTAAGTCTTTATGAAACATTGAGGGTTGAATTTGGATCAGACATAGGTGTAACAATTGTTACACCCGGTTACATAGAGTCTGAATTGACCAAAGGCAAAGTATTATTGCCACCAGAAGCCAAAATGGGCGTGGACCAAGATATGAGAGATGTTGAAGTGAGTGCAACCCCAGTGGGGTCAGTGAGTGAATGTGCAAAATCAATAGTGAATAGTACATTGAGGGGAGATAGGTACTTGACTACACCAGCTTGGATTAGAATGACATATGTAGTGAAAGTGTTGTGTCCAGAATTACTGGAGTGGAGTTTCAGAATGTTTTATTTGACTGGATCAAGTACTACTCCAGCTAGAGAAGCACCTAGTAAAAAGATTTTGGATGCTACTGGGATCAAAAACTTGTTTTATCCATCTTCAATTCGATCTCCTGAGGTCAAGACTGAATAA 1023 0.3969 MDLIHNILNIVAPPFTFFSLLLFLPPYWTFKFLLSTIYTIFFSENVAGKVHLAYEYAKRGARLALSARRETALREVADRARDFGSPDVIIMRADVSKVDDCRRLVDQTVHHFGRLDHLVNNAAISAAMMFEDVTDITNFRPVMETNFWGSVYTTRFALPHLRNSRGKIVVLSSIDSWMPAPRRSIYNASKAALVSLYETLRVEFGSDIGVTIVTPGYIESELTKGKVLLPPEAKMGVDQDMRDVEVSATPVGSVSECAKSIVNSTLRGDRYLTTPAWIRMTYVVKVLCPELLEWSFRMFYLTGSSTTPAREAPSKKILDATGIKNLFYPSSIRSPEVKTE* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4878 340 PANTHER RETINOL DEHYDROGENASE-RELATED 1 332 - -
Mal7g4878 340 PANTHER 11-BETA-HYDROXYSTEROID DEHYDROGENASE 1B-LIKE ISOFORM X1 1 332 - -
Mal7g4878 340 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 113 124 IPR002347 -
Mal7g4878 340 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 186 205 IPR002347 -
Mal7g4878 340 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 174 IPR002347 -
Mal7g4878 340 PRINTS Glucose/ribitol dehydrogenase family signature 206 223 IPR002347 -
Mal7g4878 340 PRINTS Glucose/ribitol dehydrogenase family signature 186 205 IPR002347 -
Mal7g4878 340 PRINTS Glucose/ribitol dehydrogenase family signature 113 124 IPR002347 -
Mal7g4878 340 PRINTS Glucose/ribitol dehydrogenase family signature 160 176 IPR002347 -
Mal7g4878 340 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 173 201 IPR020904 GO:0016491
Mal7g4878 340 Gene3D - 50 304 - -
Mal7g4878 340 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 51 300 IPR036291 -
Mal7g4878 340 Pfam short chain dehydrogenase 52 225 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4878 Mal-Chr7 117355521 117356953 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4878 51 232 Acyl Lipid Metabolism Gene Families AT3G12800 29.442 1.21e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4878 K22418 - zju:107417988 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4878 7 117355521 117356953 Mal7g4878 7 117355521 117356953 ECH