Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4877 ATGAGTGTAATTTGCAACATACTGAATATAGCATTGCCCCCATTGTCACTTATTCTGCTCCCTATCATCATGCTACCTTACATTTTCTTCAAATTTCTTATTTATATAAAAAGCAGGTTGGTGAGCACAGAAAATGTGGCAAGGAAAGTAGTACTAATCACTGGAGCAGCTTCAGGAATTGGCGAGCAACTAGCTTATGAGTATGCTAGGCGAGGAGCAAAGTTGTCTCTTGTTGATATTAGAAAGGAGAATCTTGTAGCAGTTGCAGATATGGCAAGGTCTCTTGGTTCTCCTGATATTATCATTATTGGTGCAGATGTGACTAAGGTTCAAGACAGTAAACTTTTTGTTGATGAAACAGTGAACCACTTTGGAAGATTGGATCATCTGGTAAATAATGCTGGAGTTATTGGGGTTCCAATGTTGATAGAGGATTTTTCTGATTTAACTAAATACACCCAAATTATGGAAACAAATTTCTGGGGAGCAGCTCATGGCACTTTATATGCAATTCCACATCTTAAAAATAGTAAAGGAAGGATCATAGTTGTTGCTTCAGCTTGTGGATGGTTTCCAATTCCAAGACTCACTATCTATAATGCAAGTAAGGCAGCAATAATAAGCTTCTTTGAGACTCTAAGAATTGAACTTGGTTGGTCCATTGGCATAACAATCGCCACACCTGGTTTTATCAAAACAAACCTAGCAATGAGGGTCATTGAAGATGAGGCTACTCTGGGAAGACTTCCATTAGGTTCAGCATTTGAATGTGCCAAAGACATAGTGAAAAGTGCATGCAGGGGAGATTTGTATGTGACAAACCCTCCATGGGTCAAAGTAATATTTTATTGTAAACTGCTTTATCCCTACCTAGTGGACTGGGCCCAACGACATATCTTTGGGCTTTTGACAAACCCTTACCAGAAGAATAACCAAGAGATTAAGGTAGAATAA 954 0.3868 MSVICNILNIALPPLSLILLPIIMLPYIFFKFLIYIKSRLVSTENVARKVVLITGAASGIGEQLAYEYARRGAKLSLVDIRKENLVAVADMARSLGSPDIIIIGADVTKVQDSKLFVDETVNHFGRLDHLVNNAGVIGVPMLIEDFSDLTKYTQIMETNFWGAAHGTLYAIPHLKNSKGRIIVVASACGWFPIPRLTIYNASKAAIISFFETLRIELGWSIGITIATPGFIKTNLAMRVIEDEATLGRLPLGSAFECAKDIVKSACRGDLYVTNPPWVKVIFYCKLLYPYLVDWAQRHIFGLLTNPYQKNNQEIKVE* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4877 317 PANTHER RETINOL DEHYDROGENASE-RELATED 1 300 - -
Mal7g4877 317 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 44 301 IPR036291 -
Mal7g4877 317 Gene3D - 35 303 - -
Mal7g4877 317 PRINTS Glucose/ribitol dehydrogenase family signature 199 218 IPR002347 -
Mal7g4877 317 PRINTS Glucose/ribitol dehydrogenase family signature 50 67 IPR002347 -
Mal7g4877 317 PRINTS Glucose/ribitol dehydrogenase family signature 125 136 IPR002347 -
Mal7g4877 317 PRINTS Glucose/ribitol dehydrogenase family signature 173 189 IPR002347 -
Mal7g4877 317 PRINTS Glucose/ribitol dehydrogenase family signature 219 236 IPR002347 -
Mal7g4877 317 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 186 214 IPR020904 GO:0016491
Mal7g4877 317 PANTHER 11-BETA-HYDROXYSTEROID DEHYDROGENASE-LIKE 6 1 300 - -
Mal7g4877 317 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 179 187 IPR002347 -
Mal7g4877 317 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 136 IPR002347 -
Mal7g4877 317 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 199 218 IPR002347 -
Mal7g4877 317 Pfam short chain dehydrogenase 49 243 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4877 Mal-Chr7 117351783 117353517 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4877 44 252 Acyl Lipid Metabolism Gene Families AT1G24360 30.233 8.20e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4877 K22418 - gmx:100808990 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4877 7 117351783 117353517 Mal7g4877 7 117351783 117353517 ECH