Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4875 ATGCACATACGCCGTCTCAGACTCGACGAAGACGACGAAAGCGCCGCCGCCGCCGCAGAAGCTCAGCCCCAACCACAACCTCAAACAGTTCCCTCGGAACCAGTCGAAATCTCCGACGACGATTTCATCGACGTCTCCGATTACCACTCCATACCTACTCCTCCACCACCGCCTCCGCCGGTTCCTCCACCTCAGGCTTCGGATTGTCCCGTCGACGATTTTCTTCGCCAGCTTGGATTGTGCTTGAAGAGAGACTCGCTTGCTACTTGTCTTCGCGAATTAGGTGATTCGGTGAATGGCTTCCAAGGGTTCGATGTTGCCACAAAGGCGAAACTCTGTTTCGAGCAGTTTCTGTTTTCCGATTTCAATTTCTGTGGCGGCGGTGTGCTTCCTCCTAATGTTGATTCAATGCATCTCACTACTCTCCCTGGTCCCTACGTTTTGCAGGTTGATGAAATTATCAATCTCAGTTGTCCTCTACGAGGCAGATATCAAGAAGCTCCTCCAAAGCTTAAAAGGTGCCTGAAGTTGTCAATGACTGATGGTATTCAGCGAGTCTTTGGAGTGGAGTACAGGCCTATTAAAGCTCTTGAAGTTTGTACGTCTTCTGGTTTAAAGGTCGCAATCTCTAATGTACAAGTGCGCCGTGGACTTTTGGTGCTGGTTCCTGAGACCATTGTACTATTGGGGGGTTTAGTTGAGCAGCTGGATGCAGCTCGAAAGCGGCTGGTGGATGAACTAAATAAGCCAGCTAGGGGAAAAAGAACCAGAAATGGAGTGCTTCCTCCTTTAGCAACCCAAGCAACTCTTGCTGCATGGCCGTCAAGTAGTGTTGCTGATACTCTCCAGGAAAACAACCAAGGTACTGGCCACAGCATTCCTGGCACTGGTAACAACTTAACAACTGAAGATACTTCACGCTTGGATGCACAAAATGCTACTTCCAATTCAATACCGCACATTGTTTCAAACGTTGAGCGAACAAATATTGACATGAGGCGCCAGCGGGGTGCCAGCATAACAACTGAATTTTCTTCGTGCATGGGTGCTCAAAATGCTACTTCCAATTCAACACCCCACATGGTTTCAAGTGTGGAGCGAATAAATATTGATATGCAGCGCCAGCAGGGTGCCAGAACAACAACCGAATATACTTCGCGCATGAGTGCTCAAAATGCTACTTCCAATTCAACACCCCACATGGTTTCAAACGTGGACCAAACAAATATTGACACGCGGAACCAGCGGGGGGCCAGCATAACAACTGAATATACTTCGCGCATGGGTGCACAAAGTGCTACTTCCAATTCAGTACCCCGCATGGTTTCAAACGTGGAGCGAATGAATATTGATATGCAGCGCCAGCAGGGTGCCAGAATAACAACTGAAGATGCATCGCTTATGGATGCACAAAATGCTACTTCCAATTCAATACCTCACATGGTTTCAAATGTGGAGCCAATGAATATTGATGTGCAGCAGGGTACCTCTCCCATGTCCCATAATAGTTCAATGGCTAACCGGACTTCTTCAATAGCTGAGGAGATGCATATAGATACTGCTAATTTTACCAGGGAAAACACTGTTAACAACCGATCTTCTCACATGAGCTCAAATGTTGCAGTGGCACATGAAGACACTATTCATGTAAGAGAAAGTTCTGTGACTACCGTGTGCTCTTCTGTTTCTGAAAATGTTGAGACAGACAGGAACAGAGTTCCTGTAATCGCAGATAATACTTCTCTGAACGTATCTACCTCTACTGTTTTTAACAACGAAGATATCCTGATGGATGATGCTAGTGACAATCCGCTCATACTCTCTGGAGACCGAGAAGTTCCTTTCACATATTTAGCTAGTTTGTCAGCCAAGTGGGCTGCAATGAAGGAGACAGATCCTCTGGTTCGGGGTAAAATTAAGTGCTTTCTGACCGGTGTAAAAGGATTCCAGTATAAGAAAAGGACAACCTACGAGCTACAAGCATATGTAGATGACGGTAGCCTTATTTCTGAAATCCTCATTGATCATGATGTTGTACAGAAAGGAATTGGTTATTCTCCTGTGGAGGTCACTGCAGCTCTTTCTTCTTCTGACACAAATGTAGTCAACAACATGAAGGAGACTATGCGCAAATTCCAAGCTTTCTTAGCAAACTTTGAGGGAGTAATACTTGTGGAATTAAATAGAAGGTATTCCCTTCCACTTGCCCTAGACATGAGTCAAGGCTGTCCTAAATCTGATGCGTGGTCCCTTCTGAGAAGGCTGAAGTCTTATCACCCTACACAAGCTCTAAACCATTTCCCTTCAGACACAATCATTTTATCCCCATAA 2331 0.4582 MHIRRLRLDEDDESAAAAAEAQPQPQPQTVPSEPVEISDDDFIDVSDYHSIPTPPPPPPPVPPPQASDCPVDDFLRQLGLCLKRDSLATCLRELGDSVNGFQGFDVATKAKLCFEQFLFSDFNFCGGGVLPPNVDSMHLTTLPGPYVLQVDEIINLSCPLRGRYQEAPPKLKRCLKLSMTDGIQRVFGVEYRPIKALEVCTSSGLKVAISNVQVRRGLLVLVPETIVLLGGLVEQLDAARKRLVDELNKPARGKRTRNGVLPPLATQATLAAWPSSSVADTLQENNQGTGHSIPGTGNNLTTEDTSRLDAQNATSNSIPHIVSNVERTNIDMRRQRGASITTEFSSCMGAQNATSNSTPHMVSSVERINIDMQRQQGARTTTEYTSRMSAQNATSNSTPHMVSNVDQTNIDTRNQRGASITTEYTSRMGAQSATSNSVPRMVSNVERMNIDMQRQQGARITTEDASLMDAQNATSNSIPHMVSNVEPMNIDVQQGTSPMSHNSSMANRTSSIAEEMHIDTANFTRENTVNNRSSHMSSNVAVAHEDTIHVRESSVTTVCSSVSENVETDRNRVPVIADNTSLNVSTSTVFNNEDILMDDASDNPLILSGDREVPFTYLASLSAKWAAMKETDPLVRGKIKCFLTGVKGFQYKKRTTYELQAYVDDGSLISEILIDHDVVQKGIGYSPVEVTAALSSSDTNVVNNMKETMRKFQAFLANFEGVILVELNRRYSLPLALDMSQGCPKSDAWSLLRRLKSYHPTQALNHFPSDTIILSP* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4875 776 MobiDBLite consensus disorder prediction 275 303 - -
Mal7g4875 776 MobiDBLite consensus disorder prediction 50 67 - -
Mal7g4875 776 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 66 452 - -
Mal7g4875 776 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 455 759 - -
Mal7g4875 776 Pfam Recq-mediated genome instability protein 1, C-terminal OB-fold 614 755 IPR032199 GO:0000166
Mal7g4875 776 SMART DUF1767_2 72 165 IPR033472 -
Mal7g4875 776 MobiDBLite consensus disorder prediction 1 69 - -
Mal7g4875 776 Pfam RecQ mediated genome instability protein 79 242 IPR013894 -
Mal7g4875 776 Gene3D - 121 247 IPR042470 -
Mal7g4875 776 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 66 452 - -
Mal7g4875 776 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 455 759 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4875 Mal-Chr7 117339377 117343763 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4875 K10990 - gmx:100803734 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4875 7 117339377 117343763 Mal7g4875 7 117339377 117343763 ECH