Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4839 ATGGGAAATTGCTGCTCCGATGTCGCCGGTGGCCGCACGGCAATCGGCGGAACTTCCGGAGGTCTACTCAATCCGGCAAACGCTTCTAACGACGCCGTCGATAACTTCTTCAAGTCTCGTGGCTACCAAGGTCTCTTCTCGCAGATCGAGTTGTCGTTTTCTGCTTCTGGTTTGCGTGATCGAGATGTGCTCTCCAAGAGTGATCCAATAATGGTTCTTTATTCAAAAGGAAAAAATGGAGCACTTGAGGAACTTGGTCGTACAGAAGTAGTTTTGAATTCATTGAGTCCGACATGGATTACTAAACAAACACTCATTTATCATTTTGAGGTTGTTCAGGTTTTAGTGTTTCGTGTTTATGATGTTGATACTCAGTTTCACAACGCAGACGTGAAGATACTTAAGCTAGAAGAACAACAATTTCTTGGTGAGGCAACATGTGCATTATCTGAGATAATTACAAAGCGTGACCGATCATTGACATTAGATTTACTCAGACAAGATTCTATCAGATCTGGCGACTCCCAGAAATGTGGAAAGCTCAAAGTGTATGCTGAGGAATGTGTTGGCTCAAAGACTACAGTAGAGATGATACTCAGGTGTTCAGATTTGGAATATAGGGATCTCTTCTCAAAGAGTGATCCCTTTTTATTAGTATCAAAAGTTGTGGAAAGTGGTGACCATATTCCTATTTGCAAAACAGAAGCTATTAAGAATGATCACAATCCGACATGGAAGCAAGTGTTCTTGAATGTTCAACAAGTAGGAAGCAAGGAAAGTCCTTTAATAATAGAGTGCTACAACTTCAATAGCAATGGAAAACATGATTTGTTGGGAAAACTGAAGACATCTTTGGTGGAGTTGGAGAAGCTCTATTCTGGTGGCCAAGGAGAACATTTATTTTTGTCTCCTGCCGTGGGTCATGATTCTCAGACCAAGGTATTAAAAAGCCGGCTATTTGTGGACAAATTTTCTGAAAGTATCCAATATACTTTCCTGGATTACTTGGCTGGGGGATTTGAATTGAACTTCATGGTGGCCATTGATTTTACAGCTTCAAATGGCAATTCACGCCTTCCAGATTCTTTGCATTATATTGATCCTTCAGGACGGCCAAATGCATACCAAAGAGCAATTATTGAGGTTGGAGAGGTGTTACAGTTTTATGATTCAGACAAGCGATTTCCTACATGGGGATTTGGAGCACGACCAATTGATGGTCCTGTCTCCCATTGTTTCAACTTGAATGGAAGCAATAACTACTGTGAGGTAGAAGGCATTCAAGGAATTATGATGGCATACACAAGTGCTCTGCTTAACGTTTCTCTTGCAGGACCAACACTTTTTGGACCTGTCATAAATAATGCTGCACTTATTGCCAGCCAATCTGTAGCAAATGGTGGAAGAAAGTACTTTATCCTGTTGATAATCACAGATGGAGTAGTGACGGATCTCCAAGAAACAAAAGATGCACTTGTTAAAGCATCGGACCTACCGCTATCAATCCTTATTGTTGGGGTAGGAGGAGCTGATTTCAAAGAAATGGAGATCTTGGATGCAGACAAGGGAGATAGGCTTGAAAGTTCATCTGGACGTGTTGCTTCACGTGATATAGTACAGTTTGTTCCATTTCGGGATGTTCAAAGTGGTGAAATTTCAGTAGTTCAAGCACTTCTAGCAGAATTACCTACTCAATTTTTAGCTTACATGCGGAGCAGAAATATCCAACCAAATCCCTAG 1740 0.4121 MGNCCSDVAGGRTAIGGTSGGLLNPANASNDAVDNFFKSRGYQGLFSQIELSFSASGLRDRDVLSKSDPIMVLYSKGKNGALEELGRTEVVLNSLSPTWITKQTLIYHFEVVQVLVFRVYDVDTQFHNADVKILKLEEQQFLGEATCALSEIITKRDRSLTLDLLRQDSIRSGDSQKCGKLKVYAEECVGSKTTVEMILRCSDLEYRDLFSKSDPFLLVSKVVESGDHIPICKTEAIKNDHNPTWKQVFLNVQQVGSKESPLIIECYNFNSNGKHDLLGKLKTSLVELEKLYSGGQGEHLFLSPAVGHDSQTKVLKSRLFVDKFSESIQYTFLDYLAGGFELNFMVAIDFTASNGNSRLPDSLHYIDPSGRPNAYQRAIIEVGEVLQFYDSDKRFPTWGFGARPIDGPVSHCFNLNGSNNYCEVEGIQGIMMAYTSALLNVSLAGPTLFGPVINNAALIASQSVANGGRKYFILLIITDGVVTDLQETKDALVKASDLPLSILIVGVGGADFKEMEILDADKGDRLESSSGRVASRDIVQFVPFRDVQSGEISVVQALLAELPTQFLAYMRSRNIQPNP* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4839 579 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 198 293 IPR035892 -
Mal7g4839 579 Gene3D C2 domain 52 195 IPR035892 -
Mal7g4839 579 Pfam Copine 362 577 IPR010734 -
Mal7g4839 579 CDD C2A_Copine 47 164 - -
Mal7g4839 579 SMART VWA_4 341 538 IPR002035 -
Mal7g4839 579 CDD vWA_copine_like 313 566 IPR010734 -
Mal7g4839 579 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 53 164 IPR035892 -
Mal7g4839 579 ProSiteProfiles VWFA domain profile. 343 562 IPR002035 -
Mal7g4839 579 SUPERFAMILY vWA-like 342 524 IPR036465 -
Mal7g4839 579 SMART C2_3c 48 161 IPR000008 -
Mal7g4839 579 SMART C2_3c 198 300 IPR000008 -
Mal7g4839 579 PANTHER COPINE 1 577 IPR045052 GO:0005544
Mal7g4839 579 ProSiteProfiles C2 domain profile. 28 162 IPR000008 -
Mal7g4839 579 PANTHER CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING COPINE FAMILY PROTEIN-RELATED 1 577 - -
Mal7g4839 579 CDD C2B_Copine 195 290 IPR037768 -
Mal7g4839 579 Pfam C2 domain 54 158 IPR000008 -
Mal7g4839 579 Pfam C2 domain 198 297 IPR000008 -
Mal7g4839 579 ProSiteProfiles C2 domain profile. 177 301 IPR000008 -
Mal7g4839 579 Gene3D C2 domain 196 313 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4839 Mal-Chr7 116850051 116858229 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4839 - - gmx:100807801 1011.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4839 7 116850051 116858229 Mal7g4839 7 116850051 116858229 ECH