Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4828 ATGGGAGAACCAAAGCGAATCCCTCTTCGAATTTTCTCAGTGCTCTTCTTCGTTATTTTTATCTCTATCTCATCGTTACACCTTCTCCATGCTTCCGATGATGCTGATGACGCCATCTTCTATGAATCATTTGATGAGGATTATGATGGCCGTTGGATTGTTTCCGTTAAGGATGATTACAACGGTGTCTGGGAGCATTCAAAGAGTGAGGGGCATGAAGATTATGGGCTTCTTGTCAGTGAGAAAGCAAGGAAATATGCTATAGTTAAAGAACTTGATGAGCCTGTGATTCTTAAGGATGAATCGGTTGTTCTTCAGTTTGAGACTCGCCTTCAGAATGGCCTTGAATGTGGTGGTGCATATCTAAAATATCTTCGACCACAGGAGGCTGGTTGGAAACCCAAGGAGTTTGACAACGATTCTCCATATTCTATCATGTTTGGTCCTGACAAGTGCGGGGCTACAAACAAGGTGCACTTCATTTTCAAGCATAAGAATCCCAAGAGTGGGGAGTATGTTGAACACCATCTCAAGTTTCCCCCATCTGTTCCTTCTGACAAGCTATCTCACGTGTACACTGCTATTTTAAAACCTGACAATGAGCTGCAAATTTTGATTGACGGGGAACAGAAGAAAAAGGCAAATTTCTTATCTTCTGAGGATTTCGAGCCTTCCCTCATCCCTCCCAAGACAATCCCAGATCCTGATGATAAGAAACCTGAGGACTGGGATGAGAGAGAGAAAATTCCAGACCCAAGTGCAGTGAAGCCCGATGACTGGGATGAGGATGCACCCTTGGAAATTCTTGATGAAGAAGCTGAAAAACCTGAAGGATGGTTGGATGATGAGCCTGAGGAGATAGATGACCCAGAGGCTTCAAAACCAGAAGATTGGGACGATGAAGAGGATGGTGAATGGGAAGCCCCAAAGATTACCAACCCACAGTGTGAAACAGCCCCTGGTTGTGGTGAGTGGAAAAGGCCAATGAAGAAGAATCCAGCATATAAGGGAAAATGGCATGCCCCCCTTATTGAAAATCCAGCTTATAAGGGTATCTGGAAGCCTCAGGATATTCCAAACCCTGATTACTTTGAACTTAAAAAACCTGATTTCGAGCCTATCGCTGCTATTGGTATTGAAATTTGGACAATGCAGGACGGCATATTGTTTGACAATATTTTGATCGCTAAAGATGATAAGATTGCAGCTTCGTACCGGGAGACTACTTGGAAGCCCAAGTTTACTATTGAGAAAGAGAAACAGAAGGAAGAAGATGTCGACACTGAATCAAATGCTCTTGCCAGCATCCAAAAGAAGGTATTTGACCTGTTATACAAGATTGCGGACATTCCCTTCCTGAGTGCCTACAAGCTTAAAATACACGATCTCATTGAAAAAGGTGAAACGCAGCCGAATCTCACCGTTGGAATTCTTGTATCCGTTGTAGTTATTGTCTTGACAGTTTTCCTCCGGATCGTATTTGGTGGGAAGAAAAAGCCAGCTAGAGTGGAGAAAACAAACACACCAGCTGCAGATACTTCCACTAACCAAGACAATGGAGAGAATGAAGAAAACAAAGAGGAGGAAACATCCAAGTCTCAGGCTCCGCGTCGGAGGGTAAAGCGAGATAATTGA 1635 0.4355 MGEPKRIPLRIFSVLFFVIFISISSLHLLHASDDADDAIFYESFDEDYDGRWIVSVKDDYNGVWEHSKSEGHEDYGLLVSEKARKYAIVKELDEPVILKDESVVLQFETRLQNGLECGGAYLKYLRPQEAGWKPKEFDNDSPYSIMFGPDKCGATNKVHFIFKHKNPKSGEYVEHHLKFPPSVPSDKLSHVYTAILKPDNELQILIDGEQKKKANFLSSEDFEPSLIPPKTIPDPDDKKPEDWDEREKIPDPSAVKPDDWDEDAPLEILDEEAEKPEGWLDDEPEEIDDPEASKPEDWDDEEDGEWEAPKITNPQCETAPGCGEWKRPMKKNPAYKGKWHAPLIENPAYKGIWKPQDIPNPDYFELKKPDFEPIAAIGIEIWTMQDGILFDNILIAKDDKIAASYRETTWKPKFTIEKEKQKEEDVDTESNALASIQKKVFDLLYKIADIPFLSAYKLKIHDLIEKGETQPNLTVGILVSVVVIVLTVFLRIVFGGKKKPARVEKTNTPAADTSTNQDNGENEENKEEETSKSQAPRRRVKRDN* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4828 544 ProSitePatterns Calreticulin family repeated motif signature. 287 299 IPR018124 GO:0005509
Mal7g4828 544 SUPERFAMILY P-domain of calnexin/calreticulin 226 365 IPR009033 GO:0005509|GO:0005515
Mal7g4828 544 MobiDBLite consensus disorder prediction 217 324 - -
Mal7g4828 544 Pfam Calreticulin family 40 395 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mal7g4828 544 PANTHER - 11 198 - -
Mal7g4828 544 PANTHER CALRETICULIN AND CALNEXIN 198 544 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mal7g4828 544 PANTHER CALRETICULIN AND CALNEXIN 11 198 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mal7g4828 544 MobiDBLite consensus disorder prediction 232 262 - -
Mal7g4828 544 MobiDBLite consensus disorder prediction 501 544 - -
Mal7g4828 544 PRINTS Calreticulin signature 112 130 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mal7g4828 544 PRINTS Calreticulin signature 141 157 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mal7g4828 544 PRINTS Calreticulin signature 344 363 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mal7g4828 544 PRINTS Calreticulin signature 239 252 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mal7g4828 544 PRINTS Calreticulin signature 376 396 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mal7g4828 544 PRINTS Calreticulin signature 287 309 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mal7g4828 544 ProSitePatterns Calreticulin family signature 2. 145 153 IPR018124 GO:0005509
Mal7g4828 544 SUPERFAMILY Concanavalin A-like lectins/glucanases 37 258 IPR013320 -
Mal7g4828 544 PANTHER - 198 544 - -
Mal7g4828 544 MobiDBLite consensus disorder prediction 519 544 - -
Mal7g4828 544 Gene3D - 40 405 - -
Mal7g4828 544 Gene3D Calreticulin/calnexin, P domain 225 369 IPR009033 GO:0005509|GO:0005515
Mal7g4828 544 MobiDBLite consensus disorder prediction 263 306 - -
Mal7g4828 544 ProSitePatterns Calreticulin family signature 1. 110 125 IPR018124 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4828 Mal-Chr7 116766314 116769651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4828 10 544 Miscellaneous Gene Families AT5G61790 72.998 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4828 K08054 - gmx:100810595 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4828 7 116766314 116769651 Mal7g4828 7 116766314 116769651 ECH