Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4741 ATGGATTCGAGTTCGGGGCAGCAAGAATTCGAGTATATGTTCAAATTGTTAATGATTGGTGATTCTGGTGTCGGCAAAAGTAGTCTTCTTCTCAGATTCACCTCCGATGATTTTGAAGATCTATCCCCCACCATTGGTGTTGATTTTAAGGTCAAATATATGACGATGGAGGGTAAAAAGCTTAAGCTTGCCATTTGGGATACTGCTGGTCAGGAGAGATTTAGAACGCTCACTAGTTCATACTACCGAGGAGCACAAGGAATCATCATGGTTTATGACGTAACACGGCGAGAAACATTTAAAAATCTCTCTGAAATATGGGCCAAGGAAATAGACCTTTATTCAACAAATCAAGACTGCATGAAGATGCTTGTTGGAAACAAAGTAGATAAGGAGGGTGATAGAGTTGTGACAAAGAAAGAGGGAATAGACTTTGCTCGGGAATATGGTTGCCTATTTATTGAATGCAGTGCTAAAACTCGAGTAAATGTGCAGCAATGCTTTGAAGAGCTTGTTTTGAAGATTCTTGATACACCTAGCCTTTTAGCTGAGGGCTCTAAGGGGGTAAAAAAGAACATTTTTAAGGACAAACCTCAGTCTGATGCATCCACCAGCGGTTGTTGCTGA 627 0.4067 MDSSSGQQEFEYMFKLLMIGDSGVGKSSLLLRFTSDDFEDLSPTIGVDFKVKYMTMEGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFKNLSEIWAKEIDLYSTNQDCMKMLVGNKVDKEGDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGVKKNIFKDKPQSDASTSGCC* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4741 208 SMART arf_sub_2 1 179 - -
Mal7g4741 208 TIGRFAM small_GTP: small GTP-binding protein domain 12 170 IPR005225 GO:0005525
Mal7g4741 208 PANTHER SMALL GTPASE FAMILY RAB PROTEIN 1 208 - -
Mal7g4741 208 ProSiteProfiles small GTPase Ras family profile. 6 208 IPR001806 GO:0003924|GO:0005525
Mal7g4741 208 ProSiteProfiles small GTPase Arf family profile. 7 176 - -
Mal7g4741 208 Pfam Ras family 15 176 IPR001806 GO:0003924|GO:0005525
Mal7g4741 208 SMART rab_sub_5 14 178 - -
Mal7g4741 208 SMART rho_sub_3 16 178 IPR001806 GO:0003924|GO:0005525
Mal7g4741 208 Gene3D - 7 208 IPR027417 -
Mal7g4741 208 PRINTS Transforming protein P21 ras signature 36 52 - -
Mal7g4741 208 PRINTS Transforming protein P21 ras signature 153 175 - -
Mal7g4741 208 PRINTS Transforming protein P21 ras signature 14 35 - -
Mal7g4741 208 PRINTS Transforming protein P21 ras signature 118 131 - -
Mal7g4741 208 PRINTS Transforming protein P21 ras signature 54 76 - -
Mal7g4741 208 SMART ran_sub_2 19 204 - -
Mal7g4741 208 ProSiteProfiles small GTPase Rho family profile. 7 176 - -
Mal7g4741 208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 181 IPR027417 -
Mal7g4741 208 PANTHER DRAB5-RELATED 1 208 - -
Mal7g4741 208 SMART ras_sub_4 11 178 - -
Mal7g4741 208 ProSiteProfiles small GTPase Rab1 family profile. 9 208 - -
Mal7g4741 208 CDD Rab18 14 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4741 Mal-Chr7 115748963 115751296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4741 15 168 EF-hand Containing Proteins AT5G27540 26.250 1.07e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4741 K07910 - gmx:100787603 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4741 7 115748963 115751296 Mal2g1497 2 17953593 17958206 PCT