Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4507 ATGCATCTAGAGCTGGATAGTTTTACAGCTTTGGTAGTGGTTTTGTGTTTCCTTGGATTGATTCTGAAGGAGACAGTAATGGGAGGTAAGAATTCAAAAGGGTCCGAGAGAAGACATGTAAATTCATCACCATCATCATCAGCATCTGTTGGTTCTTCATCTGCATGGGAAAATAACTATGGATATCCACAATCAACATATCCATATCCACAACCAAATCCATATCAAAGGCCTAATCATCGTCGCCTTACACAGGCTCCCTTGCATGACTATTCGCGGCCAAATAGGAAGTTAGATAGGAGATATTCAAGGATAGCTGATGATTATCATTCTCTCGACGAGGTTACTACTGCTCTTTCACATGCTGGCCTGGAATCGTCTAATCTCATTGTTGGCATTGATTTCACAAAAAGCAATGAATGGACAGGGAAAAGGTCATTCAATCGAAAAAGTTTACATCACATCGGAAATGGTCAAAATCCTTATGAACAAGCGATCACAATTATTGGGAAAACATTATCCACTTTTGATGAGGATAACTTGATTCCTTGTTTTGGATTTGGAGATGCATCAACTCATGATCAAGACGTATTCAGTTTCCATTCAGATGAGAGGTGCTGCAATGGATTTGAGGAAGTTTTGTCAAGATATAGAGAGGTTGTTCCAAGCCTCCGACTAGCAGGACCCACCTCATTTTCCCCTATCATTGAGATGGCCATGACTATTGTTGAGAAAAGTGGTGGCCAATATCATGTCTTGCTAATAATTGCTGATGGACAGGTGACAAGAAGTGTTGACACAGAGAATGGCAAGCTAAGTTCACAGGAAAAGAAGACAATTGATGCAATAGTAAAAGCCAGCGAGTATCCACTGTCGATAGTTTTGGTTGGAGTTGGAGATGGACCATGGGATATGATGAGGGAATTTGACGATAACATCCCAGCTCGAGCCTTTGACAATTTTCAGTTTGTGAATTTTACGGAAATAATGTCAAAGAATGTGGATTCAAACCGAAAAGAGACAGAGTTTGCTCTAGCAGCTTTGATGGAGATACCTTCTCAATATAAAGCAACCATAGATCACAACTTATTGGGGACACAAAGGGGATCTTCACCAGACAGGGTTTCTTTACCTCCACCTCAATATCTTAGGGCTTCTTCTAGTAACACCGCAACTTCTTTTCGTTCAAATAGTTTTCAGCAGAGTACACATACATATGCTAGCAACGAAAATGAAATGAGCGCGGAACCGTCTTCAGCTGGTTTATATGACAGTAAGGTTTGCCCAATTTGTCTTACTAATGGGAAGGATATGGCCTTTGGTTGCGGGCATCAGACTTGTTGTGAATGTGGTGAAAGCCTTGAATTCTGCCCTATTTGCCGGAGCACAATCGATACCAGAATAAAACTTTATTAA 1416 0.4075 MHLELDSFTALVVVLCFLGLILKETVMGGKNSKGSERRHVNSSPSSSASVGSSSAWENNYGYPQSTYPYPQPNPYQRPNHRRLTQAPLHDYSRPNRKLDRRYSRIADDYHSLDEVTTALSHAGLESSNLIVGIDFTKSNEWTGKRSFNRKSLHHIGNGQNPYEQAITIIGKTLSTFDEDNLIPCFGFGDASTHDQDVFSFHSDERCCNGFEEVLSRYREVVPSLRLAGPTSFSPIIEMAMTIVEKSGGQYHVLLIIADGQVTRSVDTENGKLSSQEKKTIDAIVKASEYPLSIVLVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTEIMSKNVDSNRKETEFALAALMEIPSQYKATIDHNLLGTQRGSSPDRVSLPPPQYLRASSSNTATSFRSNSFQQSTHTYASNENEMSAEPSSAGLYDSKVCPICLTNGKDMAFGCGHQTCCECGESLEFCPICRSTIDTRIKLY* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4507 471 Pfam Copine 151 365 IPR010734 -
Mal7g4507 471 PANTHER RING-FINGER PROTEIN 27 471 - -
Mal7g4507 471 Pfam Zinc finger, C3HC4 type (RING finger) 425 466 - -
Mal7g4507 471 MobiDBLite consensus disorder prediction 38 66 - -
Mal7g4507 471 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 402 471 IPR013083 -
Mal7g4507 471 ProSiteProfiles Zinc finger RING-type profile. 428 461 IPR001841 -
Mal7g4507 471 PANTHER COPINE FAMILY PROTEIN 1 27 471 - -
Mal7g4507 471 SMART VWA_4 126 329 IPR002035 -
Mal7g4507 471 CDD RING-HC_RGLG_plant 427 471 IPR045317 GO:0061630|GO:0070534
Mal7g4507 471 SUPERFAMILY vWA-like 127 310 IPR036465 -
Mal7g4507 471 MobiDBLite consensus disorder prediction 29 94 - -
Mal7g4507 471 SUPERFAMILY RING/U-box 422 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4507 Mal-Chr7 112980159 112983512 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4507 K16280 - gmx:100800161 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4507 7 112980159 112983512 Mal7g4507 7 112980159 112983512 ECH