Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4503 ATGCGGTTACGGTGGTTGTTAGATACATGCTCCTCTACCAACTGCGCCACCGCCACCACCAATTCAACCATCTCACTCCATCCATCGAAGAAACAACAACATGCATCAGACTCAAGCACTTCTTCTTCTTCTTCAACCTTAACCTCTGATGACAGCACCTCAACTCTTCACAGCAACTACTCCATACAAACACTCCCATCAGTCCCTTCTCTCCAGAAACTCTCTTCTCAAAACCTCAAAAACTTCTCCATCTCCTACCACTGCCTCACCTCCCTCACACCCCACCCTTCCCGCCCAATCACCTCCCTCGCCCTCCACAACAACCTCCTCTACGCCGCAACGGAAAACCAAATCAACGTCTACGATCGTCACACGTGTACCAATCTCCACACCTTCCATGCTCCATGTGGCTCCACTAAAGCCATCACCTTCTCCAAAGACATGGTCTTCACAACCCACCAAGACTGCAAAATCCGCGTCTGGAACCACAACCACCACCAGCACCGCAAGTTAACCACTCTTCCCACCGTTAACGACCGTCTCCGCCGTTTTCTCCTCCCACAAAACTACATAACCGTCCGCCGCCACGTAAAACGTCTCTGGATAGAACACGCCGATGCCGTCACCGACCTCGCCGTGTCAAACGGAGTCATCTACTCCGTTTCATGGGATAAAACACTAAAAATATGGAGAATCTCTGATCTTCGTTGCGTTGAATCCCTCAAAGCACACGAAGACGCAGTCAACGCGGTTGCAGTTTCTAACAACGGAACCGTCTACACAGGATCATCCGATAAACGAATACGCGTTTGGGCGAAACCCGTCGGAGAAAAAAAGCACGTTCTAGTTGCGACTTTGGAGAAGCATAAATCAGCGGTTAATGCTTTAGCATTAAACGACGATGGTTCAGTGTTGTTTTCCGGTGCATGCGACCGTTCGATATTGGTGTGGGAACGAGAGGATAGTGCGAATCATATGATTGTGAGTGGGGCTTTGAGGGGGCATCAAAAAGCGATACTTTGTTTGATCAACGTCTCTGATTTGTTGCTGAGTGGTTCGGCTGATCGGACGGTTAGGATTTGGAAGCGGATTTATGATGGTTCGTTTTGTTGTGTTGGTGTTCTTGATGGTCACCGGAAACCGGTTAAGTCGTTGGTGGCAGTTCAAGAGTATGATGATGAAAGTCAAAGTTCCTCAAACGGTGTCGTTTCTGTTTTTAGTGGTTCTTTAGATGGTGAGATAAAGGTTTGGCAACTTTCTATTGGGTGTGATTTGGCCTCTGAGGGTCAAGATTTTCTGAATTCCTAG 1308 0.4824 MRLRWLLDTCSSTNCATATTNSTISLHPSKKQQHASDSSTSSSSSTLTSDDSTSTLHSNYSIQTLPSVPSLQKLSSQNLKNFSISYHCLTSLTPHPSRPITSLALHNNLLYAATENQINVYDRHTCTNLHTFHAPCGSTKAITFSKDMVFTTHQDCKIRVWNHNHHQHRKLTTLPTVNDRLRRFLLPQNYITVRRHVKRLWIEHADAVTDLAVSNGVIYSVSWDKTLKIWRISDLRCVESLKAHEDAVNAVAVSNNGTVYTGSSDKRIRVWAKPVGEKKHVLVATLEKHKSAVNALALNDDGSVLFSGACDRSILVWEREDSANHMIVSGALRGHQKAILCLINVSDLLLSGSADRTVRIWKRIYDGSFCCVGVLDGHRKPVKSLVAVQEYDDESQSSSNGVVSVFSGSLDGEIKVWQLSIGCDLASEGQDFLNS* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4503 435 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 332 362 - -
Mal7g4503 435 ProSiteProfiles Trp-Asp (WD) repeats profile. 241 271 IPR001680 GO:0005515
Mal7g4503 435 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 286 318 - -
Mal7g4503 435 ProSiteProfiles Trp-Asp (WD) repeats profile. 286 318 IPR001680 GO:0005515
Mal7g4503 435 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 22 422 IPR045182 -
Mal7g4503 435 SMART WD40_4 234 272 IPR001680 GO:0005515
Mal7g4503 435 SMART WD40_4 368 418 IPR001680 GO:0005515
Mal7g4503 435 SMART WD40_4 325 362 IPR001680 GO:0005515
Mal7g4503 435 SMART WD40_4 125 162 IPR001680 GO:0005515
Mal7g4503 435 SMART WD40_4 194 231 IPR001680 GO:0005515
Mal7g4503 435 SMART WD40_4 85 122 IPR001680 GO:0005515
Mal7g4503 435 SMART WD40_4 279 318 IPR001680 GO:0005515
Mal7g4503 435 Gene3D - 278 430 IPR015943 GO:0005515
Mal7g4503 435 Pfam WD domain, G-beta repeat 370 417 IPR001680 GO:0005515
Mal7g4503 435 Pfam WD domain, G-beta repeat 283 317 IPR001680 GO:0005515
Mal7g4503 435 Pfam WD domain, G-beta repeat 332 362 IPR001680 GO:0005515
Mal7g4503 435 Pfam WD domain, G-beta repeat 236 271 IPR001680 GO:0005515
Mal7g4503 435 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 241 271 - -
Mal7g4503 435 MobiDBLite consensus disorder prediction 25 50 - -
Mal7g4503 435 ProSiteProfiles Trp-Asp (WD) repeats profile. 201 240 IPR001680 GO:0005515
Mal7g4503 435 Gene3D - 3 186 IPR015943 GO:0005515
Mal7g4503 435 Gene3D - 189 277 IPR015943 GO:0005515
Mal7g4503 435 PANTHER F21J9.19 22 422 - -
Mal7g4503 435 PRINTS G protein beta WD-40 repeat signature 405 419 IPR020472 -
Mal7g4503 435 PRINTS G protein beta WD-40 repeat signature 349 363 IPR020472 -
Mal7g4503 435 PRINTS G protein beta WD-40 repeat signature 218 232 IPR020472 -
Mal7g4503 435 ProSiteProfiles Trp-Asp (WD) repeats profile. 332 362 IPR001680 GO:0005515
Mal7g4503 435 SUPERFAMILY WD40 repeat-like 84 420 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4503 Mal-Chr7 112965594 112966901 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4503 235 418 Acyl Lipid Metabolism Gene Families AT3G18860 27.368 4.03e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4503 - - gmx:100817776 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4503 7 112965594 112966901 Mal7g4503 7 112965594 112966901 ECH