Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4500 ATGGCATCAACAGTAATTGCAATGACCATGATGAACACAAAGTGCTTGAACAACTCACCAAAACTCTCCAACCCAACAAAACTCATTACAAAACCCACTTCACTTCTTTCCCTTAAGAACCTTTTTCCAAAGAAACTTTCCACAACAGAAAACACAAAACTAACAACTTCCATAGCAGGAACAGCACTTGCTGGAGCAATATTCTCAACACTCTCAACCTGTGATGCAGCTTTTGCAGCACAACAAATAGCTGAAATAGCAGAAGGATCATCAGATAACCGTGGTTTAGCACTTTTGTTACCAATAATTCCAGCCATAGCTTGGGTTCTGTTCAACATTCTTCAACCAGCACTTAACCAAATCAACCGTATGCGTAACGATAAAGGAGTTATCATTGGTTTGGGTCTTGGTGGTGGCTTAGCAGCTTCAGGGTTTGTCTCACCACAAGATGCAATGGCTAGTGAAATGGCTGCAATTGCTGAAGCTGCTGGTAGTGATAATAGGGGTCAGCTTCTGTTGTTTGTGGTAGCACCAGCTATTCTTTGGGTTCTTTATAATATTCTGCAGCCTGCTCTTAACCAAATCAACAGAATGAGACAGTGA 603 0.4146 MASTVIAMTMMNTKCLNNSPKLSNPTKLITKPTSLLSLKNLFPKKLSTTENTKLTTSIAGTALAGAIFSTLSTCDAAFAAQQIAEIAEGSSDNRGLALLLPIIPAIAWVLFNILQPALNQINRMRNDKGVIIGLGLGGGLAASGFVSPQDAMASEMAAIAEAAGSDNRGQLLLFVVAPAILWVLYNILQPALNQINRMRQ* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4500 200 Pfam Photosystem II protein Y (PsbY) 166 198 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Mal7g4500 200 Pfam Photosystem II protein Y (PsbY) 92 124 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Mal7g4500 200 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 200 IPR038760 GO:0009523
Mal7g4500 200 Hamap Photosystem II protein Y [psbY]. 92 126 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Mal7g4500 200 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4500 Mal-Chr7 112940030 112940632 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4500 K02723 - zju:107428525 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4500 7 112940030 112940632 Mal7g4500 7 112940030 112940632 ECH