Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4498 ATGCATCAACACCTTGAAGTACTCATCATCTTCCTCCCATTCCTCATCGGTTTAACCCTAACATTCAACTACTTCATCACACTCACCACATGGATCTTCAACACATGTCTTCGATCCGACAAACACCTCATCAAAACCTACGGTTCATGGGCTTTAATCACCGGAGCAACCGACGGCATCGGAAAAGCCCTAGCCTACCAACTAGCACAAAAAAATCTCAACCTCATTCTTGTAAGCAGAAACTCAAAGAAACTTGAAACAGTTAAAACCGAAATCATAACAAAATACCCTCACATTCACATAAAAACCATCACTATCGACTTTTCCGGAGACTTCATTGAAGGTCTCCGGGAAATAGAAGTTTTGGCTAGAGATTTGGATCTTGGAATATTGATAAACAACGTTGGGATTACATATCCTAAGGCAATGTTTTTTCATGAGGTGAAGGAGGAAATGTGGATGAAGATTCTGAGTGTAAATATTGAAAGTACAACGAGAATAACAAAAGCGGTTTTGGGTGGGATGATGGAAAGAAAAAGGGGTGCAATAGTAAATATTGGGTCTGGTGCTGCGGTGGTTGTGCCTTCACATCCTCTCTTCACAATCTATGCTGCAACTAAAGCATACGTAGATCAGTTTTCAAGATCTTTATATATGGAGTACAAACAATATGGAATCCACGTGCAATGTCAGGTACCACTATATGTTGCAACAAATATGGTATCAAGGGTAGCATCTATTGGAAGAGATTCTTTATTCATACCAACACCTCAAGGTTATGCAAGATCCTCTATTCGTAAAATTGGGTATGAAACAAGGTGCACACCTTATTGGCCTCACTCAATTCAGTGGGCCTTTGCACGCTTAATTCCTGACCCACTTCTTGATTATTGGCGCATGTCTATTGGTTTGCGACGTAGGAATCACAAGGACTAG 936 0.406 MHQHLEVLIIFLPFLIGLTLTFNYFITLTTWIFNTCLRSDKHLIKTYGSWALITGATDGIGKALAYQLAQKNLNLILVSRNSKKLETVKTEIITKYPHIHIKTITIDFSGDFIEGLREIEVLARDLDLGILINNVGITYPKAMFFHEVKEEMWMKILSVNIESTTRITKAVLGGMMERKRGAIVNIGSGAAVVVPSHPLFTIYAATKAYVDQFSRSLYMEYKQYGIHVQCQVPLYVATNMVSRVASIGRDSLFIPTPQGYARSSIRKIGYETRCTPYWPHSIQWAFARLIPDPLLDYWRMSIGLRRRNHKD* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4498 311 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 203 222 IPR002347 -
Mal7g4498 311 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 181 189 IPR002347 -
Mal7g4498 311 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 137 IPR002347 -
Mal7g4498 311 PRINTS Glucose/ribitol dehydrogenase family signature 224 241 IPR002347 -
Mal7g4498 311 PRINTS Glucose/ribitol dehydrogenase family signature 203 222 IPR002347 -
Mal7g4498 311 PRINTS Glucose/ribitol dehydrogenase family signature 50 67 IPR002347 -
Mal7g4498 311 PRINTS Glucose/ribitol dehydrogenase family signature 175 191 IPR002347 -
Mal7g4498 311 PRINTS Glucose/ribitol dehydrogenase family signature 126 137 IPR002347 -
Mal7g4498 311 Gene3D - 42 271 - -
Mal7g4498 311 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 46 301 IPR036291 -
Mal7g4498 311 CDD 17beta-HSD1_like_SDR_c 48 291 - -
Mal7g4498 311 PANTHER ENOYL-(ACYL CARRIER) REDUCTASE 10 309 - -
Mal7g4498 311 Pfam short chain dehydrogenase 50 244 IPR002347 -
Mal7g4498 311 PANTHER RH59310P 10 309 - -
Mal7g4498 311 PIRSF 11-beta-HSD1 2 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4498 Mal-Chr7 112918170 112923935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4498 11 308 Lipid Metabolism Gene Families AT1G24470 57.718 1.73e-122 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4498 K10251 - pvy:116128476 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4498 7 112918170 112923935 Mal7g4498 7 112918170 112923935 ECH