Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4179 ATGTCTGGTTTTATTGCTGCCAAGAAAAGATTTTCAGAGGAAAATATGTGTTTTTCCAATATGGCGAATCAAGATAAGTCATCTCTTTTGAAAGGTGATCATAGTGTGAGGTCCGAGGCTCTAGATGATGATGTTATTGGTGATGATAGCCCTATTCTTTCTGGGCTCCCTGATGATGTTTCAAAGCATTGTCTTGCACTCGTGCCTCGCTCTAACTTCCTTGCTATGGGTGGTGTCTGTAAGAGATGGAAACACTTTATTCAAAGCAAAGAATTCATAACCGTGCGAAAATTGGCCGGGCTGCTTGAGGAATGGCTTTATGTCTTAACAGCTGATAGTGAAGGAAAAGGAAGCCATTGGGAGGTTATGGATTCTTTTGGTCATAATCGCCGATCTCTTCCACCGATGCCTGGTCCACGGAAGGCTGAATTTGGGGTTGTGGTTCTTAACGGAAAGCTTCTTGTTATGGCTGGCTATTCATCAATTAATGGAAATGTTTCTGTTTCAGCAGAGGTTTACCAATATAATTCTAACCTCGACAGTTGGATCAGATTGTCAAACATGAATGTTGCTCGGTACGACTTTGCTTGTGCAGAAGTCAATGGCTTGGTTTATGCTGTTGGAGGATATGGAGCAGAAGGTGACAGTCTCTCCAGCACCGAGGTTTATGATCCGGATACTAACAAGTGGACAGTGATTGAGAGCCTACGCCGTCCAAGATGGGGTTGCTTTGCCTGTGGATTAGAGGGGAAGCTCTATGTGATGGGTGGAAGGTCAAGCTTCACAATTGGAAATTCTAAGTTTGTTGATGTTTACAACCCAGAGAAGCATAGTTGGTGTGAGATGAAAAATGGGTGTGTCATGGTAACTGCTCATGCAGTACTAGAGAAGAAGTTGTTCTGTATGGAGTGGAAGAATCAACGGAAGTTGTCAATATTCAATCCAGATGATAATTCATGGAAAACGGTACCAGTACCTCTGACGGGGAGTTCGAGTGTTGGTTTTAGATTCGGGATACTGAATGGTAAGCTTCTGCTGTTTTCACTAAAGGAAGATCCTACATATAGGACTTTGTTGTATGATCCAAATGCAGCCCCGGGGTCTGAGTGGGGAACTACTGATATAAAACCATCTGGTTTGTGCTTGTGCAGTGTAACTATCAAGGCCTGA 1170 0.4325 MSGFIAAKKRFSEENMCFSNMANQDKSSLLKGDHSVRSEALDDDVIGDDSPILSGLPDDVSKHCLALVPRSNFLAMGGVCKRWKHFIQSKEFITVRKLAGLLEEWLYVLTADSEGKGSHWEVMDSFGHNRRSLPPMPGPRKAEFGVVVLNGKLLVMAGYSSINGNVSVSAEVYQYNSNLDSWIRLSNMNVARYDFACAEVNGLVYAVGGYGAEGDSLSSTEVYDPDTNKWTVIESLRRPRWGCFACGLEGKLYVMGGRSSFTIGNSKFVDVYNPEKHSWCEMKNGCVMVTAHAVLEKKLFCMEWKNQRKLSIFNPDDNSWKTVPVPLTGSSSVGFRFGILNGKLLLFSLKEDPTYRTLLYDPNAAPGSEWGTTDIKPSGLCLCSVTIKA* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4179 389 Pfam Kelch motif 240 284 IPR011498 GO:0005515
Mal7g4179 389 SMART kelc_smart 203 250 IPR006652 GO:0005515
Mal7g4179 389 SMART kelc_smart 152 202 IPR006652 GO:0005515
Mal7g4179 389 SMART kelc_smart 251 299 IPR006652 GO:0005515
Mal7g4179 389 Pfam Kelch motif 191 236 IPR006652 GO:0005515
Mal7g4179 389 Pfam Kelch motif 142 189 IPR006652 GO:0005515
Mal7g4179 389 Gene3D - 89 386 IPR015915 GO:0005515
Mal7g4179 389 PANTHER KELCH REPEAT F-BOX PROTEIN 1 389 - -
Mal7g4179 389 SUPERFAMILY F-box domain 49 94 IPR036047 GO:0005515
Mal7g4179 389 Pfam F-box domain 53 92 IPR001810 GO:0005515
Mal7g4179 389 PANTHER OS02G0202900 PROTEIN 1 389 IPR045887 -
Mal7g4179 389 SUPERFAMILY Kelch motif 103 349 IPR015915 GO:0005515
Mal7g4179 389 SMART fbox_2 56 96 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4179 Mal-Chr7 108645509 108646787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4179 56 234 Miscellaneous Gene Families AT4G33900 28.571 8.27e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4179 - - gmx:100815474 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4179 7 108645509 108646787 Mal7g4179 7 108645509 108646787 ECH