Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2954 ATGAGTGACAATCTGAAGGAAAAAGTGAACGCCATAGGAGAGCGTCTCAAAATCAATGGAGCTGAGATGGGTAGAAAGATGAGTGCTGGAATAGGTACTATGAGTTTCAAGATGAAAGAGTTTTTCCAAGAACCAAACCAAGCTGATAAACTCGTTTATGATGCTACTTCTGAGTCTCTTGATGAGCCTAATTGGGATATCATTCTCCAACTATGTGACATGGTCAATGCTGAAAAACTTCACACTTGTGATGTGGTACGTGGGATCAAGAAAAGGATCATGATGAAAAGTGTTAGAGGTCAGTATTTGGCTTTGGTTTTGCTTGAAGCTTTGGTGGAGAATTGTGATAAGGGTTTCTTTGAGGTTGCAACTGAGAGAGTTCTTGATGAAATGGTTAAGATTGTTTATGATCATGATCAGAGTTTTGTTGCTTGTAAGGATAAGGCTTTGATGATGATTCAGAGTTGGGGAGAGTCCACTACTGAGCTTCGGTATCTTCCTGTTTATGAAGAAACTTATAAGAGTTTGAAATCAAGGGGTATTCGGTTCCCTGGTCGTAACAACGAAAGCTTGGCTCCTATTATAACTCGTTCTCACTCTCCCTCTGCACCAGAGGTTGATCCCAGTCTTGCACATCTTATCCAGCGCGATACTCAGCCTGATCGCAGTCTTGCACATCTTATTCAGCGTGAAAATCCTGTGCCAAGTCTCAAGCCTGAACAAACAAAGGAAGCTTTTGATGTTGCAAGAAATAGCACTGAGCTTCTCTCTTCCGTGTTATCTTCTTCACCGCAGCAAGATGTTCTCAAGCAAGATTTGACCATTACATTAGTACAACAATGCCATCAGTCCCAATCTACCGTCCATAGAATCATCGAGACTGTTGGGGATAATGAAGCATTGCTTTTTGAGGCCTTGCATGTAAATGATGAGATTCAAAAGGTTCTCTCCAAATATGAAGAGTTGAAGAAGAAGCCTAAAGTTTCTCCACATGAACCAGAACCGAATATGATGATACCTATTGCTATTGAGTCAGATGAGTCACCCCATTTTAAAGAAGAGGCCTTCATTAGAAAACCAGCTTGTTCAAGAGTGCAGGGATTGAGCCATGATGACATGATGGATGATCTTGATGAAATGATTTTTGGCAAAAAGGGTGGGGATGCTGCATCTGAATTGAGACAAGATCCTAAGAGAACCAACAATCATCAAAATATGACTCTATCTACTTATAAGTTATAA 1242 0.4058 MSDNLKEKVNAIGERLKINGAEMGRKMSAGIGTMSFKMKEFFQEPNQADKLVYDATSESLDEPNWDIILQLCDMVNAEKLHTCDVVRGIKKRIMMKSVRGQYLALVLLEALVENCDKGFFEVATERVLDEMVKIVYDHDQSFVACKDKALMMIQSWGESTTELRYLPVYEETYKSLKSRGIRFPGRNNESLAPIITRSHSPSAPEVDPSLAHLIQRDTQPDRSLAHLIQRENPVPSLKPEQTKEAFDVARNSTELLSSVLSSSPQQDVLKQDLTITLVQQCHQSQSTVHRIIETVGDNEALLFEALHVNDEIQKVLSKYEELKKKPKVSPHEPEPNMMIPIAIESDESPHFKEEAFIRKPACSRVQGLSHDDMMDDLDEMIFGKKGGDAASELRQDPKRTNNHQNMTLSTYKL* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2954 413 SUPERFAMILY ENTH/VHS domain 42 184 IPR008942 -
Mal7g2954 413 Gene3D - 39 201 IPR008942 -
Mal7g2954 413 SUPERFAMILY GAT-like domain 182 324 - -
Mal7g2954 413 PANTHER TOM1-LIKE PROTEIN 1 1 404 - -
Mal7g2954 413 ProSiteProfiles GAT domain profile. 237 324 IPR004152 GO:0035091|GO:0043130
Mal7g2954 413 SMART VHS_2 48 180 IPR002014 GO:0035091|GO:0043130
Mal7g2954 413 MobiDBLite consensus disorder prediction 386 413 - -
Mal7g2954 413 Gene3D - 240 334 IPR038425 -
Mal7g2954 413 Coils Coil 305 325 - -
Mal7g2954 413 Pfam GAT domain 250 324 IPR004152 GO:0035091|GO:0043130
Mal7g2954 413 ProSiteProfiles VHS domain profile. 55 184 IPR002014 GO:0035091|GO:0043130
Mal7g2954 413 Pfam VHS domain 46 180 IPR002014 GO:0035091|GO:0043130
Mal7g2954 413 CDD VHS 48 178 - -
Mal7g2954 413 PANTHER TOM1-LIKE PROTEIN 1 1 404 IPR044836 GO:0035091|GO:0043130|GO:0043328
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2954 Mal-Chr7 92718870 92722753 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2954 - - tcc:18599517 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2954 7 92718870 92722753 Mal7g2954 7 92718870 92722753 ECH