Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal7g2820 | ATGGCAGGAACAGCAACAGGGTGTTACAAATGCGGCAGACCAGGTCACTGGTCACGCGACTGTCCTTTCACCGCCCCCAATTCCAATCCCAATCCCAACCCTAACACCACCGCCGATCTTCCACCACCACCTACCTCTTCCTTCAAACCTTCCGGGCCCAGATCCGCCGTCGAAAAGCCCAAAAAGCTCCCCCGCACCCGACCCAAACTCACTCCCGAGCTACTTCTCTCCGATGACGGCCTCGGTTACGTTCTTCGCTACTTCCCTCGCAACTTCAAATACCACGGTCGCGGCCAAGAGGTTCGTGATTTGGGTAAACTGCTTGAGTTATACTCTGATTGGCACTCTCGTTTGCTACCTTATTACTCCTTTAATCAATTTGTTCATAAAGTTGAGAAAGTTGCTGCTACAAAGCGTGTTAGGACTAGCCTTAGAGAATTGAGAGAAAGAGTTGCAAATGGTGGAGATCCGTCAAAATTGCGTGAACCACCAGTTGTGGACGACATCCCAGATGGTGAACAAGTATCTGCAGAAAATGGGGAAGCAAGTCGTCAAGAGAATGAGATGTTTGCAGAACCTGAAAATGTTAACGACATTCAAGAAGACTTGTTCAATGATATATATGACAAAGCTACCGAAGAACCTTCTCAGCCCATGCAAAATGTGATTTCTGTGAGTACCGAACCCAAAAGTAGCACAACTGAAAAGACATTAAATGAAGTCCCAAATAATGGAGCCAGTCTGTCCAGCAATGCTGAGATAACAGCAGAGCAGAAAGCCCGTATGGAAGCTAATAGGTTGAAAGCACTAGAAAGGCGCGCAGCCCGAGCCAGCATACCACAGTCTTCCTAG | 852 | 0.48 | MAGTATGCYKCGRPGHWSRDCPFTAPNSNPNPNPNTTADLPPPPTSSFKPSGPRSAVEKPKKLPRTRPKLTPELLLSDDGLGYVLRYFPRNFKYHGRGQEVRDLGKLLELYSDWHSRLLPYYSFNQFVHKVEKVAATKRVRTSLRELRERVANGGDPSKLREPPVVDDIPDGEQVSAENGEASRQENEMFAEPENVNDIQEDLFNDIYDKATEEPSQPMQNVISVSTEPKSSTTEKTLNEVPNNGASLSSNAEITAEQKARMEANRLKALERRAARASIPQSS* | 284 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal7g2820 | 283 | MobiDBLite | consensus disorder prediction | 12 | 70 | - | - | |
| Mal7g2820 | 283 | MobiDBLite | consensus disorder prediction | 149 | 168 | - | - | |
| Mal7g2820 | 283 | Pfam | Zinc knuckle | 7 | 22 | IPR001878 | GO:0003676|GO:0008270 | |
| Mal7g2820 | 283 | MobiDBLite | consensus disorder prediction | 149 | 188 | - | - | |
| Mal7g2820 | 283 | ProSiteProfiles | Zinc finger CCHC-type profile. | 8 | 22 | IPR001878 | GO:0003676|GO:0008270 | |
| Mal7g2820 | 283 | Gene3D | - | 4 | 69 | - | - | |
| Mal7g2820 | 283 | PANTHER | TIMELESS INTERACTING-RELATED | 4 | 279 | IPR040038 | GO:0000076 | |
| Mal7g2820 | 283 | Pfam | Replication Fork Protection Component Swi3 | 69 | 150 | IPR012923 | GO:0005634|GO:0006974|GO:0048478 | |
| Mal7g2820 | 283 | PANTHER | TIMELESS-INTERACTING PROTEIN | 4 | 279 | - | - | |
| Mal7g2820 | 283 | MobiDBLite | consensus disorder prediction | 35 | 49 | - | - | |
| Mal7g2820 | 283 | SUPERFAMILY | Retrovirus zinc finger-like domains | 6 | 24 | IPR036875 | GO:0003676|GO:0008270 | |
| Mal7g2820 | 283 | MobiDBLite | consensus disorder prediction | 214 | 256 | - | - | |
| Mal7g2820 | 283 | MobiDBLite | consensus disorder prediction | 212 | 260 | - | - | |
| Mal7g2820 | 283 | SMART | c2hcfinal6 | 7 | 23 | IPR001878 | GO:0003676|GO:0008270 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal7g2820 | K10904 | - | gmx:100808422 | 368.237 |