Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2816 ATGCGAGGCTTATTGGGAATCACAAAAACCTTGTTCAACAGAACAAACCCTTCATTCATCTCACCATGCAGAAATCGCTCATACAGTCTAATCCCAATGGTGATTGAAACCTCTTCACGAGGTGAAAGAGCCTACGATATCTTCTCTCGTCTTCTCAAAGAACGCATCGTTTGCATCAATGGACCTATCTCTGATGATACTGCTCATGTTGTTGTTGCTCAGCTTTTGTTTCTTGAATCTGAAAACCCTTCTAAGCCGATTAATATGTATCTCAATTCCCCTGGTGGTGCTGTTACTGCAGGGCTTGCAATTTATGATACTATGCAGTACATTCGGTCTCCGATCAACACAATATGTTTGGGTCAGGCTGCGTCCATGGGTTCTCTACTGTTGTGTGCGGGTGCAAAGGGTCAAAGGCGTTCTCTTCCGAATGCTACAATCATGATTCACCAGCCTTCTGGTGGATACAGTGGCCAGGCAAAGGATATTGCAATTCATACCAAGCAGATTGTTCGTATGTGGGATGCGTTGAATGAGTTGTACGTCAAGCACACGGGCCAACCACTTGACGTAATTCAGAAGAATATGGATAGGGATTACTTTATGACTGCTCAAGAGGCAAAGGAGTTTGGGATTATTGATGAGGTTATTGATCAGAGACCTATGACTTTGGTTTCTGATGCTGTTGGTGATGAAGGCAAAGATAAAGGTTCAAATTAG 720 0.4333 MRGLLGITKTLFNRTNPSFISPCRNRSYSLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRSLPNATIMIHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTAQEAKEFGIIDEVIDQRPMTLVSDAVGDEGKDKGSN* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2816 239 SUPERFAMILY ClpP/crotonase 39 221 IPR029045 -
Mal7g2816 239 ProSitePatterns Endopeptidase Clp histidine active site. 139 152 IPR033135 -
Mal7g2816 239 Hamap ATP-dependent Clp protease proteolytic subunit [clpP]. 30 220 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal7g2816 239 Gene3D - 21 224 - -
Mal7g2816 239 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 7 238 - -
Mal7g2816 239 ProSitePatterns Endopeptidase Clp serine active site. 117 128 IPR018215 -
Mal7g2816 239 PRINTS Clp protease catalytic subunit P signature 195 214 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal7g2816 239 PRINTS Clp protease catalytic subunit P signature 86 106 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal7g2816 239 PRINTS Clp protease catalytic subunit P signature 46 61 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal7g2816 239 PRINTS Clp protease catalytic subunit P signature 117 134 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal7g2816 239 PRINTS Clp protease catalytic subunit P signature 138 157 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal7g2816 239 CDD S14_ClpP_2 46 216 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal7g2816 239 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 7 238 IPR023562 -
Mal7g2816 239 Pfam Clp protease 40 219 IPR023562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2816 Mal-Chr7 90649057 90650987 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2816 K01358 - csin:114316149 396.356