Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal7g2782 | ATGGCTCAACCACCTCTCTCTGCTGAAGCACCGCCTAATTCTTCTTCTTCTGCAGCTCCTCCATCATCACCGGCCCCACCAATCTCTTACGGCGGTCATCAAAATGTTAATGCTTCCGCAAATTCTCAGCAGCCGCAGTCACATTCTGGGATGAAACCAAATCCTGCTGCAAATCCTCCTATTCAACAACCAGTTCATAGTCACCCACCACGTGCCGCCGCACCTCAATTTTCTTATAATTTTCCCCAAAGTGCGCCACCGCCTTTTACTTCCAACCAACATGCGCAATCTAACACTAACGTGCCGGATTCCGTTCCACAAGATTTTAGTAAAGTGTCATCTGCATCAAGTAACCTACATCCTGTTCCTGCTCCTACCTCTATATCCGCAATGCCACCACACTCTGACCCTAACTATCGGCCAGCTAATTTATGGATGCCAACTGCCCCAAATTTTCCCTTCCATCCTGTAATGCCCGGAACTCCTGGTACTCCTGGTCCCCCTGGATTAGCAAAACCTGTGATAAGCACAGATTTTTCCTCAGCTGCAGTACCGAGACAAAATATACCTTCCATGGTTGCTCCACCTCAGGGATATTGGTTACAACCTCCACAAATGAGTGGTCTACTTAGGCCACCATTTCATCAATATCCTGCTGCTTTTCCTGGCCCCTTTCCATTTCCAGCACGTGGTGTTGCTCTCCCTGCTGTTCCAGTACCTGATTCTCAACCTCCTGGTGTTACTCCTGTGGGTGCTGCCGCCATTTCTGCTCCTTCTGCTTCCAGTCATTTGCTGAGGGGAACAACTGGTGTGCAGACAGAAGTAATTTCAGCACATACTGATGACAAGCACAAATTAAACGCCATTGGGACACAGAATGAGGATTCTGCTAATGATCAGCTAGATGCTTGGACTGCCCACAAGACTGAAGCAGGGATTGTATACTATTATAATGCTTTGACAGGGCAATCAACATATGATAAACCTGCTGGCTTTAAAGGGGAGGCTCACCAAGTTTCTGTGCAGCCCACTCCAGTTTCAATGGTAGATCTGCCTGGTACTGATTGGCAGTTGGTCTCTACTAGTGATGGGAAAAAATATTACTATAACAATCGAACCAAGACAAGCTGCTGGCAAATTCCCAATGAGGTAGCTGAATTGAAAAAAAAGCAGGACAATGATGTTACTAAAGATCATCCAATGCCCGTTCCAAATACTAATGTATTGTCTGATAGAGGGTCTGGAATGGTTACTCTGAATGCTCCCGCTATTACTACTGGTGGTCGTGATGCTGTAGCTTCTAAACCCTCTATCGTACAGAGCTCACCATCAGCACTGGATTTGATCAAGAAGAAGCTGCAGGAATCAGGAGCACCTGTTACATCCTCTTCTATTCCTACTCCATCAGTGCAATCAGGGTCTGAATCAAATGGTTCAAAAGCAGCGGACTCTACAGCTAAGAGCCTGCAAAATGATAATAGCAAAGACAAAGAAAAAGATGCTAATGGTGATGCTAATGCCTCTGATACATCTTCAGATTCAGAAGATGAGGATAGTGGGCCTTCAAAGGAGGAGTGCATAAATCAATTTAAGGAGATGCTTAAGGAGCGTGGTGTGGCACCATTCTCAAAGTGGGAGAAAGAACTACCAAAAATAGTATTTGATCCCCGTTTTAAGGCTATCCCTAGCTATTCTGCTAGGAGATCCTTGTTTGAACATTTTGTTAAAAATCGTGCGGAAGAGGAACGCAAGGAAAAACGTGCTGCACAGAAGGCTTCAATTGAGGGGTTTAAGCAGTTACTAGATGAAGCCTCTGAGGATATTGATGACAACACTGATTATCACACTTTTCGAAAGAAATGGGGAAATGATCCACGGTTTGAGGCATTGGACCGCAAGGAACGAGAGCACCTTCTGAACGAAAGAGTGCTTCCTTTAAAGAAAGCCACTGAAGAAAAAGCTCAAGCAATGCGTGATGCTGCTTCTGACAGTTTTAAGTCAATGCTTAAAGAACAAGGAGATATAACTTTCAACTCCCGTTGGTCCAGGGTTAAAGAGAGTTTAAGAGATGACCCGAGATATAAATCTGTGAAACACGAGGATAGGGAATTATTGTTCAATGAGTATATTTCCGAGTTGAAAGCTGCTGAACATGCAGCAGAACGAGAAACCAGAGCTAAAAGGGAGGAGCAGGACAAGCTGCGGGAGAGGGAGCGGGAGCTGCGTAAAAGGAAGGAAAGAGAAGAACATGAAATGGAAAGGGTACGACTAAAAATTCGAAGGAAGGAGGCAGTTTCTTCTTTTCAAGCTTTACTCGTGGAGAGAATCAAAGACCCTATGGCATCATGGACAGAATCGAAGCCTAAACTAGAAAAAGATCCTCAAGGACGTGCAACCAATTCTGATCTTGATTCAGCTGACATGGAAAAACTCTTCCGGGATCATGTAAAGATGCTTCAGGAACGTCGTGCTCACGATTTTAGAGCTCTTCTAGCTGAATTCTTGACTTCTGAAGCCGCGTCTCAAGAAACTGACGATGGTAAAACAGTGCTTAATTCCTGGTCTACAGCAAAGCGTCTTTTAAAATCTGATCCAAGATATAACAAGGTTGCAAGCAAAGATAGAGAAGCCTTGTGGCGTCGGTATGCAGAGGATATGATGCGGCGCCAAAAGTCATCTCATGATTCAAAGGAAGAAAAACATACAGATGCCAGAGGTAGAAAGTCTCTAGAATTTTCCAAACATCCATTGGAATCAGGGAGATCTCATGAGAGAAGATAA | 2781 | 0.4455 | MAQPPLSAEAPPNSSSSAAPPSSPAPPISYGGHQNVNASANSQQPQSHSGMKPNPAANPPIQQPVHSHPPRAAAPQFSYNFPQSAPPPFTSNQHAQSNTNVPDSVPQDFSKVSSASSNLHPVPAPTSISAMPPHSDPNYRPANLWMPTAPNFPFHPVMPGTPGTPGPPGLAKPVISTDFSSAAVPRQNIPSMVAPPQGYWLQPPQMSGLLRPPFHQYPAAFPGPFPFPARGVALPAVPVPDSQPPGVTPVGAAAISAPSASSHLLRGTTGVQTEVISAHTDDKHKLNAIGTQNEDSANDQLDAWTAHKTEAGIVYYYNALTGQSTYDKPAGFKGEAHQVSVQPTPVSMVDLPGTDWQLVSTSDGKKYYYNNRTKTSCWQIPNEVAELKKKQDNDVTKDHPMPVPNTNVLSDRGSGMVTLNAPAITTGGRDAVASKPSIVQSSPSALDLIKKKLQESGAPVTSSSIPTPSVQSGSESNGSKAADSTAKSLQNDNSKDKEKDANGDANASDTSSDSEDEDSGPSKEECINQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPSYSARRSLFEHFVKNRAEEERKEKRAAQKASIEGFKQLLDEASEDIDDNTDYHTFRKKWGNDPRFEALDRKEREHLLNERVLPLKKATEEKAQAMRDAASDSFKSMLKEQGDITFNSRWSRVKESLRDDPRYKSVKHEDRELLFNEYISELKAAEHAAERETRAKREEQDKLRERERELRKRKEREEHEMERVRLKIRRKEAVSSFQALLVERIKDPMASWTESKPKLEKDPQGRATNSDLDSADMEKLFRDHVKMLQERRAHDFRALLAEFLTSEAASQETDDGKTVLNSWSTAKRLLKSDPRYNKVASKDREALWRRYAEDMMRRQKSSHDSKEEKHTDARGRKSLEFSKHPLESGRSHERR* | 927 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal7g2782 | 926 | PANTHER | TRANSCRIPTION ELONGATION REGULATOR 1 | 103 | 924 | IPR045148 | GO:0003712|GO:0070063 | |
| Mal7g2782 | 926 | SUPERFAMILY | FF domain | 651 | 717 | IPR036517 | - | |
| Mal7g2782 | 926 | SUPERFAMILY | FF domain | 813 | 891 | IPR036517 | - | |
| Mal7g2782 | 926 | Gene3D | FF domain | 589 | 646 | IPR036517 | - | |
| Mal7g2782 | 926 | MobiDBLite | consensus disorder prediction | 717 | 753 | - | - | |
| Mal7g2782 | 926 | MobiDBLite | consensus disorder prediction | 490 | 504 | - | - | |
| Mal7g2782 | 926 | ProSiteProfiles | WW/rsp5/WWP domain profile. | 298 | 331 | IPR001202 | GO:0005515 | |
| Mal7g2782 | 926 | MobiDBLite | consensus disorder prediction | 886 | 926 | - | - | |
| Mal7g2782 | 926 | Gene3D | - | 341 | 400 | - | - | |
| Mal7g2782 | 926 | Gene3D | FF domain | 508 | 588 | IPR036517 | - | |
| Mal7g2782 | 926 | Gene3D | FF domain | 647 | 725 | IPR036517 | - | |
| Mal7g2782 | 926 | MobiDBLite | consensus disorder prediction | 456 | 489 | - | - | |
| Mal7g2782 | 926 | Pfam | WW domain | 303 | 329 | IPR001202 | GO:0005515 | |
| Mal7g2782 | 926 | ProSiteProfiles | FF domain profile. | 761 | 818 | IPR002713 | - | |
| Mal7g2782 | 926 | Pfam | FF domain | 661 | 709 | IPR002713 | - | |
| Mal7g2782 | 926 | Pfam | FF domain | 527 | 574 | IPR002713 | - | |
| Mal7g2782 | 926 | Pfam | FF domain | 595 | 641 | IPR002713 | - | |
| Mal7g2782 | 926 | Pfam | FF domain | 763 | 815 | IPR002713 | - | |
| Mal7g2782 | 926 | Pfam | FF domain | 826 | 882 | IPR002713 | - | |
| Mal7g2782 | 926 | Gene3D | - | 299 | 340 | - | - | |
| Mal7g2782 | 926 | ProSiteProfiles | FF domain profile. | 590 | 645 | IPR002713 | - | |
| Mal7g2782 | 926 | SUPERFAMILY | FF domain | 518 | 583 | IPR036517 | - | |
| Mal7g2782 | 926 | CDD | WW | 304 | 329 | IPR001202 | GO:0005515 | |
| Mal7g2782 | 926 | SMART | ww_5 | 299 | 331 | IPR001202 | GO:0005515 | |
| Mal7g2782 | 926 | SMART | ww_5 | 351 | 383 | IPR001202 | GO:0005515 | |
| Mal7g2782 | 926 | MobiDBLite | consensus disorder prediction | 28 | 53 | - | - | |
| Mal7g2782 | 926 | Coils | Coil | 713 | 765 | - | - | |
| Mal7g2782 | 926 | SUPERFAMILY | FF domain | 582 | 651 | IPR036517 | - | |
| Mal7g2782 | 926 | ProSiteProfiles | WW/rsp5/WWP domain profile. | 356 | 383 | IPR001202 | GO:0005515 | |
| Mal7g2782 | 926 | ProSiteProfiles | FF domain profile. | 658 | 712 | IPR002713 | - | |
| Mal7g2782 | 926 | ProSitePatterns | WW/rsp5/WWP domain signature. | 304 | 329 | IPR001202 | GO:0005515 | |
| Mal7g2782 | 926 | MobiDBLite | consensus disorder prediction | 1 | 134 | - | - | |
| Mal7g2782 | 926 | MobiDBLite | consensus disorder prediction | 390 | 414 | - | - | |
| Mal7g2782 | 926 | MobiDBLite | consensus disorder prediction | 782 | 805 | - | - | |
| Mal7g2782 | 926 | MobiDBLite | consensus disorder prediction | 77 | 124 | - | - | |
| Mal7g2782 | 926 | SUPERFAMILY | WW domain | 303 | 334 | IPR036020 | GO:0005515 | |
| Mal7g2782 | 926 | MobiDBLite | consensus disorder prediction | 456 | 526 | - | - | |
| Mal7g2782 | 926 | Gene3D | FF domain | 758 | 818 | IPR036517 | - | |
| Mal7g2782 | 926 | Gene3D | FF domain | 819 | 885 | IPR036517 | - | |
| Mal7g2782 | 926 | SMART | FF_2 | 658 | 712 | IPR002713 | - | |
| Mal7g2782 | 926 | SMART | FF_2 | 590 | 645 | IPR002713 | - | |
| Mal7g2782 | 926 | SMART | FF_2 | 820 | 885 | IPR002713 | - | |
| Mal7g2782 | 926 | SMART | FF_2 | 523 | 577 | IPR002713 | - | |
| Mal7g2782 | 926 | SMART | FF_2 | 761 | 818 | IPR002713 | - | |
| Mal7g2782 | 926 | CDD | WW | 354 | 383 | IPR001202 | GO:0005515 | |
| Mal7g2782 | 926 | ProSitePatterns | WW/rsp5/WWP domain signature. | 356 | 381 | IPR001202 | GO:0005515 | |
| Mal7g2782 | 926 | SUPERFAMILY | WW domain | 355 | 387 | IPR036020 | GO:0005515 | |
| Mal7g2782 | 926 | SUPERFAMILY | FF domain | 754 | 822 | IPR036517 | - | |
| Mal7g2782 | 926 | PANTHER | TRANSCRIPTION ELONGATION REGULATOR HOMOLOG | 103 | 924 | - | - | |
| Mal7g2782 | 926 | ProSiteProfiles | FF domain profile. | 523 | 577 | IPR002713 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal7g2782 | K12824 | - | gmx:100815386 | 1292.72 |