Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2746 ATGCCAACGCCATCATCGTTCCCAACTCACAACTTCAAGCGCTTCAAACCCACCGATCTATGCATCGTCAAACCCTTCCTCTCTTCCAAAACCCCTCTCTCCGACGCCGTTTCTTCTCTTGACGTTTTGCATCCCAAAGGCATTCGTTTACCTTCCCACGTTCTCGTTTCTCTATTGCGCCGTTGCTCTGATACCAAGTCTTATAAAGAGGGTAAGCTTGTTCATCTTCATTTGAAGCTTACCGGTTTTAAACAACCCCCTACGCTTATTGCTAATCATTTGATTCATATGTATTTTTGTTGTGGTGATTATGTTCGTGCACGTAAGGTGTTTGATAAAATGGATGTTAGAAATTTGTATTCTTGGAATAATATGCTTTCTGGGTATGTTAAATTAGGGATGATGAAACAAGCTAGTGGGATGTTTCATCAAATGCCGAAGAAGGATTGTGTGTCGTGGAATACGATGGTGGTTGGTTATGCGCATTGTGGGAGGTTTAGTGAGGCTTTGAGGTTTTATGGATGGATGAGGAGGGTTTGTATTCGATATAATGAGTTTACGTTTGCTAGTGTTTTGATTGTTTGTGTGAAGTTGAAAGAGTTTGAACTTTGTAGGCAGATTCATGGGCAAGTTTTGGTTGTTGGGTTTTTATCGAATGTGGTTGTTTCTAGCTCAATTTTAGATGCCTATGCAAAATGTGGTAAAATGGAAGATGCTATGAGATTGTTTGATGCTATGACTGTGAGGGATATTCCTGCTTGGACGACGTTGGTTTCAGGATATGCTTTATGTGGGGATATGGATTCAGCTGCTGAAATGTTTAGTCAGATGCCTAAGAAAAATTCATATTCGTGGACGGCTTTGATCTGCGGTTATGTAAGAAATGGTATGGATTATAAAGCTCTTGGAGTGTTTAGAAAGATGATCAAGCATCGAGTTAGGCCTGATGAATTTACATTCAGTAGTTGCCTGTTTGCCTGTGCTACTATTGCTTCACTGAAGCATGGTAAACAAATACATGCATATTTGGTGCGGAATAACATTAGACCTACTCCTGTTGTTATTAGTGCTATTGTTGACATGTATGCAAAATGTGGAAGGATGGAGACTGCCAGGCATGTCTTTAGTTTCGCTGGAAATGTGCAAGATGTAGTGTTGTGGAATACTATGATATCAGCACTGGCTTACTATGGCTATGGTAAAGAAGCAGTTATGATGCTCAATGATATGCTGAAATCAGGAGTGAAGCCAAATAGGAACACTTTGGTTGCCATTCTAAATGCTTGTAGTCATTCCGGTCTTGTTCACGAAGGGGTTCAGTTTTTCAAGTCCATGACTAATGAGCACGGTGTTGTCCCAGACCTAGAACACTACGCACACCTAATTGATCTTTTTGGTCGAGCTGAATGTTTTAATGAATCGCTGAAGGATATATTCATGATCGATTGTAAACCAGGTGACCATGTCTTGTATTCATTGCTCGGTGTATGTAGACTTCATGGAAGTATACGACTCGGAAGAGAAGTATCTGAATTCCTTATTAAATGGCAGCCTCAATCTTCTGCTGCTAATGTATTACTTTCTAGTATATATGCTGCGCTTGTGAAATGGGGATTGGTTGAGGAATTAAGACATATTACGGATGAGAGACGCATGAGGAAAGATCGGTCCAGTAGTTGGATTGAAATTGAAAATGAGGTCCATGCTTTCACTGTATCAGAACAGCATACTCACCCTTTGAAGGAAACAACATACTCAGCTTTGGGGCACTTAATTAACCAGATAGAGGACAATGCCCCATACCTAACTGACAGATAG 1818 0.4054 MPTPSSFPTHNFKRFKPTDLCIVKPFLSSKTPLSDAVSSLDVLHPKGIRLPSHVLVSLLRRCSDTKSYKEGKLVHLHLKLTGFKQPPTLIANHLIHMYFCCGDYVRARKVFDKMDVRNLYSWNNMLSGYVKLGMMKQASGMFHQMPKKDCVSWNTMVVGYAHCGRFSEALRFYGWMRRVCIRYNEFTFASVLIVCVKLKEFELCRQIHGQVLVVGFLSNVVVSSSILDAYAKCGKMEDAMRLFDAMTVRDIPAWTTLVSGYALCGDMDSAAEMFSQMPKKNSYSWTALICGYVRNGMDYKALGVFRKMIKHRVRPDEFTFSSCLFACATIASLKHGKQIHAYLVRNNIRPTPVVISAIVDMYAKCGRMETARHVFSFAGNVQDVVLWNTMISALAYYGYGKEAVMMLNDMLKSGVKPNRNTLVAILNACSHSGLVHEGVQFFKSMTNEHGVVPDLEHYAHLIDLFGRAECFNESLKDIFMIDCKPGDHVLYSLLGVCRLHGSIRLGREVSEFLIKWQPQSSAANVLLSSIYAALVKWGLVEELRHITDERRMRKDRSSSWIEIENEVHAFTVSEQHTHPLKETTYSALGHLINQIEDNAPYLTDR* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2746 605 Gene3D Tetratricopeptide repeat domain 11 157 IPR011990 GO:0005515
Mal7g2746 605 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 181 573 - -
Mal7g2746 605 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 48 279 - -
Mal7g2746 605 TIGRFAM PPR: pentatricopeptide repeat domain 423 454 IPR002885 -
Mal7g2746 605 TIGRFAM PPR: pentatricopeptide repeat domain 225 251 IPR002885 -
Mal7g2746 605 TIGRFAM PPR: pentatricopeptide repeat domain 283 317 IPR002885 -
Mal7g2746 605 TIGRFAM PPR: pentatricopeptide repeat domain 385 418 IPR002885 -
Mal7g2746 605 TIGRFAM PPR: pentatricopeptide repeat domain 120 151 IPR002885 -
Mal7g2746 605 TIGRFAM PPR: pentatricopeptide repeat domain 253 280 IPR002885 -
Mal7g2746 605 TIGRFAM PPR: pentatricopeptide repeat domain 151 178 IPR002885 -
Mal7g2746 605 Pfam PPR repeat 224 250 IPR002885 -
Mal7g2746 605 Pfam PPR repeat 92 118 IPR002885 -
Mal7g2746 605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 281 315 IPR002885 -
Mal7g2746 605 Pfam PPR repeat family 280 328 IPR002885 -
Mal7g2746 605 Pfam PPR repeat family 148 194 IPR002885 -
Mal7g2746 605 Pfam PPR repeat family 383 430 IPR002885 -
Mal7g2746 605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 383 417 IPR002885 -
Mal7g2746 605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 118 152 IPR002885 -
Mal7g2746 605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 219 253 IPR002885 -
Mal7g2746 605 Gene3D Tetratricopeptide repeat domain 296 584 IPR011990 GO:0005515
Mal7g2746 605 Gene3D Tetratricopeptide repeat domain 158 295 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2746 Mal-Chr7 89700532 89702349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2746 47 596 Glycoside Hydrolase AT3G49170 28.881 4.00e-76 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2746 - - lja:Lj3g3v3500060.1 851.662