Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2720 ATGGAAACTCGTAGTCGGAAGCGGGCGGAGGCTTCCTCAGCTGCCCCTTCATCTTCTTCCTCATCTCCCAAATCTCGTTCTACCAAACGCCCTCGTTTATCATCTTCCACCGCCGCCGCATCAACCACCGTAACACCACCACCACCACCAACCACTAATACTCGCTCACGCGCCTCCAGAACTCCTAAAAATCCTCCTCAGATGGACTCAAACAATGAATCATCCTCTTCGCGGCGTCGTGGAAAGAATTCGGATAATTCTGATAAGGGAAAGGAAAAAGAACACGATGTTAGGGTTAGGGATAGAGAAAGAGATGCAGAGAGAGGTTTGGCTTTGAATGTTGAAACTGGTGCTGGTGCTGGTGCTGGTGTTGGTGATGGGGATGATGATGATAGTGACAGTGGTGTTGGTACTTTGCATCAGAATCTAACATCAGCGAGTAGTGCACTACAGGGGTTGCTTCGAAAACTTGGTGCTGGTTTGGATGATTTGCTACCATCATCTGGAATGGGTTCTTCCTCTCATCAGAGTGGAAGGTTGAAGAAGATTCTGTTTGGTTTGCGTGCTGATGGAGAAGAAGGGAGACAAGTTGAGGCTTTGACTCAGCTTTGTGAAATGCTATCTATTGGGACTGAGGATTCGTTGAGTACTTTTTCGGTTGATTCGTTTGTTCCCGTGCTTGTTGGGTTGCTGAATCATGAGAGTAATCCTGATATTATGCTGCTTGCAGCGAGGGCGCTGACACATCTTTGTGATGTGTTGCCTTCGTCTTGTGCTGCTGTTGTGCATTATGGAGCTGTTTCGATCTTCTGCGCGAGGTTGCTTACTATTGAGTATATGGACTTGGCTGAACAGTCCCTTCAAGCTCTAAAGAAGATATCACAGGAGCATCCAACTGCCTGCCTACGAGCTGGGGCTCTCATGGCTGTACTCTCTTATTTGGACTTCTTCTCAACTGGAGTTCAGCGTGTTGCATTGTCTACTGCTGCAAATATGTGCAAGAAGCTTCCATCAGATGCATCTGACTTTGTGATGGAAGCTGTTCCTCTTCTGACCAACCTCCTTCAGTACCATGATGCTAAGGTGCTGGAGCATGCCTCTGTTTGTTTGACTCGAATAGCTGAAGCATTTGCATCATCTTCAGACAAATTAGATGAATTATGCAATCATGGACTGGTAACACAAGCTGCCTCCCTCATTTCTAACAGCAGTTCTGGAGGTGGACAGGCTTCTCTCAGTACGCCAACATATACTGGTTTAATCCGACTTCTTTCAACTTGTGCAAGCGGGTCCCCTCTTGGTGCTAAAACTCTGCTTCTTCTTGGAATTAGTGCTATTCTTAAAGATATTCTCTATGGTTCTGGAGTTTCTTCTAATGCATCTGTTTCTCCTGCATTAAGTAGGCCACCGGAGCAGATATTTGAGATTGTAAACCTGGCAAATGAGCTTCTCCCACCATTGCCACAAGGAACTATTTCCCTCCCTGTCAGCACCAACTTTGTGAAGGGGCCTGTTGTAAAAAAGTCTCCTGCTGGCAGTTCTGCGCAACAAGAAGACACAAATGGAAATGTTCAGGAGATATCTGCTCGTGAGAAGCTATTAAATGAACAACCTGAGCTACTTGGGCAATTTGGGATGGATCTCCTCCCAGTTTTAATACAGATATATGGTTCTAGTGTCAACATACCTGTTCGGCACAAATGTCTTTCGGTCATTGGAAAGTTGATGTATTTCAGCCCAGCGGAGATGATCCAGTCTTTGTTAAGCGTGACAAATATATCAAGTTTCTTAGCTGGAGTTTTGGCATCGAAAGATCCACATGTATTGGTACCTGCCTTGCAAGTTGCTGAAATTCTTATGGAAAAGCTGCCCGGGACATTCTCTAAGATGTTTATCAGAGAAGGTGTCGTTCATGCGGTGGAGCAACTTATTTTGCCTGGAAATTCAACCAATGTCTCTACACAAGCATCTTCAGCAGAGAAGGATACTGATTCTACACCCGGAGCATCATCTCGCCCTAGGCGTAATCGGCGACGCTCTGGCAACTCCAATCCCGACGGAGATGATTCAAAGAGTCCTGTTACAGTAAATGTTGGTTCACCTCCAAGTTCTGCGAATATTCCAACAGCAAATTCTAGTATCCGGTTATCTGTTAGCGCAGCTGCAAAAACTTTTAAAGATCAGTACTTTCCTTCGGATCCTGGGGCTGTTGAAGTGGGTGTTACTGATGATCTTTTGCATCTGAAAAATCTTTGCATGAAGTTGAATGCTGGTGTTGATGACCAAAGGGCTAATGGTAAAGGGAAATCTAAAACTTCTGGATTTGGTCTGGAGGAGTGTTTAATCGGGGTCATATCTGACATGCTAAAGGAACTTGGCAAAGGAGATGGTGTATCCACTTTTGAATTTATTGGTAGCGGTGTTGTTGCAGCTTTGCTAAATTATTTTTCTTGTGGGTATTTCTCTAAGGATAAACCCTTAGAAACCCACCTGCCTAAGCTTCGCAAACAAGCACTCACGAGGTTTAAGTTATTTATTACAGTTGCACTGCCTACCAATATTGACAATAGGGATGCAGCTCCTATGACTGTCTTAGTTCAAAAGCTTCAAAATGCTTTGTCCTCCATGGAGCGTTTCCCTGTTTTGCTGAGTCAATCACCTAGGTCATCCAGTGGAAGTGCACGCCTCTCCTCTGGACTAAGTGCATTGTCACAGCCCTTCAAATTGCGTCTTTGTCGAGCCCAAGGAGAAAAGTCACTTAAGGATTATTCAAACAATGTTGTATTGATTGACCCATTAGCTAGTTTAGCAGCCATTGAGGAATTTCTTTGGCCTCGTATCCAGCGAAGTGAATCTGTTCAGAAGTCCACTGCACCTGCTGGGAATTCTGAATCTGGGACAAGTCCTGTAGGTGCTGGTGTTCCACCTCCTTCTACTTCTACTCCGCCCACTACCCGTCGTCATTCTACGAGAACCAGGTCATCTGCTAGTTTAGGGGATACCCCCAGAAAAGAATTAACTCAAGATAAAACCTCGAGTTCATCTAAAGGTAAGGGAAAAGCTGTATTAAAGCCACAAGAGGAGGCAAGAGGACCTCAAACCAGGAATGCTTCACGCAGAAGAGCAGCTCTTGATAAAGATGTTCAAATGAAACCTGCAAATGGGGATTCTACTTCTGAGGATGAAGATTTAGAAATATCTCCTGTTGAAATTGATGAGGCTTTGGTGATCGAAGATGATGATGATGATATTTCTGATGATGAAGATGATGACCATGATGATATGCTGAGGAATGACGCCCTTCCTGTTTGCCTACCTGACAATGTTCATGATGTAAAATTGGGCGACTCAGCTGAGGAGAGTGCTGTTACTCCTGCAACTAACGATGGCCAGGCTAATGCAGCTTCTGGTTCTAGTAGCAAAGTTGGTTCAGTCAGGGGATCAGACACTGCAGATTTTAGGAGTGGCTATTCTTCTAGCTCACGAGGTGCAATGTCATTTGCTGCTGCTGCCATGGCTGGACTTGGATCTGCCAATAGCAGAGGAATCAGAGGTGGCAGAGATCGGCACGGGCGTCCATTGTTTGGTAGTTCTAATGATCCTCCGAAGTTACTATTCACTGCTGGTGGGAAACAATTGAACAGGCAGTTGACTATTTATCAAGCAGTTCAAAGACAGCTTGTAGAAGATGAAGATGACGATGGGAGATTTGCTGGAAGTGACTTTGTGTCGAGTGATGGAAGCAGAATGTGGGGTGACATTTTCATAATAACTTATCAGAAAGCAGATAGCCAAACAGACAGGGCTTCTCCAGGAGGCCCAAGTTCTAACACGTCAAAAACTAGTAAATCTGGCTCTGTATCAAATTCCAGCTCTGAAGTAAAGCTGCATCAGACATCTGTAGTAGATAGTATCTTGCAAGGAGAATTGCCTTGTGAGCTGGAGAAATCTAATCCCACATACGATATATTGGCTCTATTGCGTGTACTGGAGGGTTTGAACCAGCTCGCACCTCGTTTGAGGGCCCAAGTGGCTACTGATAGTTTTGCTGAGGGAAAATTTTTGGATCTAGATGAGCTAGTTGTTGCCACAGGTTCTAAGGTTCCTCCTGAAGAATTTATAAGCAGCAAGCTTACTCCAAAATTAGCTAGGCAGATACAAGATGCCCTTGCCCTATGCAGTGGCAGTCTTCCCTCATGGTGTTACCAGTTAACTAAAGCGTGTCCTTTTTTGTTTCCATTTGAGATCCGAAGACAATACTTCTATTCAACTGCCTTTGGGTTATCTCGTGCACTGTATCGACTCCAACAGCAGCAGGGTGCCGATGGGCATGGATCAACAAATGAAAGAGAGGTTAGGGTTGGAAGGCTGCAGCGCCAAAAGGTCCGTGTCTCTCGAAACCGCATTTTAGATTCCGCTGCCAAAGTGATGGAATTGTATTCTAGCCAAAAGGCTGTACTTGAAGTAGAATATTTTGGTGAAGTTGGCACTGGCCTTGGTCCCACTCTTGAGTTCTATACACTTCTAAGCCACGATTTACAAAAAGTTGGACTTCTGATGTGGAGATCAGGTTCTGATAAAATGGAAATTGATGGAGATGAAAAGAAAAAGAAAAGCAGTGAAGGCAACATTGCTAGAGATGGGGAACTTGTTCAAGCTCCTCTTGGGTTGTTTCCTCGTCCCTGGCCTGCAAATGCTGATGCATCAGAGGGTAGCCAGCTTTTTAAAGTGATTGAATATTTTCGGCTTTTAGGCCGTGTAGTCGCTAAAGCTCTTCAAGATGGACGTCTATTAGATTTGCCATTATCTGTAGCTTTTTATAAGCTTGTTCTTGGTCAAGATCTTGATTTGCATGACATTCTTTACCTTGATGCTGAACTTGGGAAAACTTTGCAAGAGTTGAATGCCCTTGTTTGCCGGAAACATAATATAGAATCTATTGGTGGTGGTAATACTGGTACAGTAGCAAATTTGCATTACCGTGGAGCTCCGATTGCAGATCTCTGTTTGGATTTTACCCTTCCTGGTTTTCCAGAGTACACCTTGAAATCTGGGGATGAAATTGTTGACCTCAATAATCTGGAGGATTATATATCCATGGTTGTTGATGCTACTGTCAAGACTGGAATAACGCGCCAACTAGAAGCATTTAGAGCAGGGTTCAATCAGGTTTTTGACATCTCATCTTTACAAATATTTACGCCTCACGAATTGGATTATTTGCTTTGCGGCCGTAGAGAATTGTGGAAGACAGAGACACTAGCTGATCATATAAAGTTTGACCATGGGTATACTGCCAAGAGCCCCGCAATAGTGAATTTACTTGAAATTATGGGAGAGTTCACACCGGAGCAGCAGCGTGCCTTCTGTCAATTTGTTACGGGAGCACCTAAGCTACCGCCTGGTGGACTGGCTGTTCTAAATCCAAAATTAACGATTGTGAGAAAGCTCTCGTCAACTGCAGCTAATACTACATCCAATGGGAACGGACCTTCAGAAACAGCAGATGATGACCTGCCAAGTGTGATGACGTGTGCAAATTACCTGAAGCTTCCTCCTTATTCTACCAAGGAAATTATGTACAAGAAGCTAATGTATGCAATCAATGAAGGCCAGGGATCCTTTGATTTATCATGA 5637 0.4433 METRSRKRAEASSAAPSSSSSSPKSRSTKRPRLSSSTAAASTTVTPPPPPTTNTRSRASRTPKNPPQMDSNNESSSSRRRGKNSDNSDKGKEKEHDVRVRDRERDAERGLALNVETGAGAGAGVGDGDDDDSDSGVGTLHQNLTSASSALQGLLRKLGAGLDDLLPSSGMGSSSHQSGRLKKILFGLRADGEEGRQVEALTQLCEMLSIGTEDSLSTFSVDSFVPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSIFCARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDASDFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAFASSSDKLDELCNHGLVTQAASLISNSSSGGGQASLSTPTYTGLIRLLSTCASGSPLGAKTLLLLGISAILKDILYGSGVSSNASVSPALSRPPEQIFEIVNLANELLPPLPQGTISLPVSTNFVKGPVVKKSPAGSSAQQEDTNGNVQEISAREKLLNEQPELLGQFGMDLLPVLIQIYGSSVNIPVRHKCLSVIGKLMYFSPAEMIQSLLSVTNISSFLAGVLASKDPHVLVPALQVAEILMEKLPGTFSKMFIREGVVHAVEQLILPGNSTNVSTQASSAEKDTDSTPGASSRPRRNRRRSGNSNPDGDDSKSPVTVNVGSPPSSANIPTANSSIRLSVSAAAKTFKDQYFPSDPGAVEVGVTDDLLHLKNLCMKLNAGVDDQRANGKGKSKTSGFGLEECLIGVISDMLKELGKGDGVSTFEFIGSGVVAALLNYFSCGYFSKDKPLETHLPKLRKQALTRFKLFITVALPTNIDNRDAAPMTVLVQKLQNALSSMERFPVLLSQSPRSSSGSARLSSGLSALSQPFKLRLCRAQGEKSLKDYSNNVVLIDPLASLAAIEEFLWPRIQRSESVQKSTAPAGNSESGTSPVGAGVPPPSTSTPPTTRRHSTRTRSSASLGDTPRKELTQDKTSSSSKGKGKAVLKPQEEARGPQTRNASRRRAALDKDVQMKPANGDSTSEDEDLEISPVEIDEALVIEDDDDDISDDEDDDHDDMLRNDALPVCLPDNVHDVKLGDSAEESAVTPATNDGQANAASGSSSKVGSVRGSDTADFRSGYSSSSRGAMSFAAAAMAGLGSANSRGIRGGRDRHGRPLFGSSNDPPKLLFTAGGKQLNRQLTIYQAVQRQLVEDEDDDGRFAGSDFVSSDGSRMWGDIFIITYQKADSQTDRASPGGPSSNTSKTSKSGSVSNSSSEVKLHQTSVVDSILQGELPCELEKSNPTYDILALLRVLEGLNQLAPRLRAQVATDSFAEGKFLDLDELVVATGSKVPPEEFISSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFEIRRQYFYSTAFGLSRALYRLQQQQGADGHGSTNEREVRVGRLQRQKVRVSRNRILDSAAKVMELYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKVGLLMWRSGSDKMEIDGDEKKKKSSEGNIARDGELVQAPLGLFPRPWPANADASEGSQLFKVIEYFRLLGRVVAKALQDGRLLDLPLSVAFYKLVLGQDLDLHDILYLDAELGKTLQELNALVCRKHNIESIGGGNTGTVANLHYRGAPIADLCLDFTLPGFPEYTLKSGDEIVDLNNLEDYISMVVDATVKTGITRQLEAFRAGFNQVFDISSLQIFTPHELDYLLCGRRELWKTETLADHIKFDHGYTAKSPAIVNLLEIMGEFTPEQQRAFCQFVTGAPKLPPGGLAVLNPKLTIVRKLSSTAANTTSNGNGPSETADDDLPSVMTCANYLKLPPYSTKEIMYKKLMYAINEGQGSFDLS* 1879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2720 1878 Gene3D Hect, E3 ligase catalytic domains 1401 1640 - -
Mal7g2720 1878 SUPERFAMILY Hect, E3 ligase catalytic domain 1452 1871 IPR035983 GO:0004842
Mal7g2720 1878 MobiDBLite consensus disorder prediction 1263 1295 - -
Mal7g2720 1878 MobiDBLite consensus disorder prediction 1121 1159 - -
Mal7g2720 1878 Gene3D Hect, E3 ligase catalytic domain 1750 1876 - -
Mal7g2720 1878 Pfam HECT-domain (ubiquitin-transferase) 1546 1878 IPR000569 GO:0004842
Mal7g2720 1878 Gene3D - 170 487 IPR011989 -
Mal7g2720 1878 MobiDBLite consensus disorder prediction 1033 1047 - -
Mal7g2720 1878 ProSiteProfiles HECT domain profile. 1578 1878 IPR000569 GO:0004842
Mal7g2720 1878 MobiDBLite consensus disorder prediction 951 974 - -
Mal7g2720 1878 PANTHER HECT E3 UBIQUITIN LIGASE-RELATED 51 1878 - -
Mal7g2720 1878 MobiDBLite consensus disorder prediction 1059 1094 - -
Mal7g2720 1878 MobiDBLite consensus disorder prediction 1178 1201 - -
Mal7g2720 1878 MobiDBLite consensus disorder prediction 1 140 - -
Mal7g2720 1878 SUPERFAMILY ARM repeat 180 654 IPR016024 -
Mal7g2720 1878 SMART arm_5 211 252 IPR000225 GO:0005515
Mal7g2720 1878 SMART arm_5 337 375 IPR000225 GO:0005515
Mal7g2720 1878 SMART arm_5 294 334 IPR000225 GO:0005515
Mal7g2720 1878 MobiDBLite consensus disorder prediction 650 670 - -
Mal7g2720 1878 MobiDBLite consensus disorder prediction 10 42 - -
Mal7g2720 1878 MobiDBLite consensus disorder prediction 686 709 - -
Mal7g2720 1878 Gene3D - 530 659 IPR011989 -
Mal7g2720 1878 MobiDBLite consensus disorder prediction 75 110 - -
Mal7g2720 1878 MobiDBLite consensus disorder prediction 650 709 - -
Mal7g2720 1878 MobiDBLite consensus disorder prediction 951 1098 - -
Mal7g2720 1878 MobiDBLite consensus disorder prediction 54 74 - -
Mal7g2720 1878 MobiDBLite consensus disorder prediction 983 1002 - -
Mal7g2720 1878 MobiDBLite consensus disorder prediction 1118 1159 - -
Mal7g2720 1878 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIP12 51 1878 IPR045322 GO:0006511|GO:0061630
Mal7g2720 1878 CDD HECTc 1460 1873 IPR000569 GO:0004842
Mal7g2720 1878 SMART hect_3 1471 1878 IPR000569 GO:0004842
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2720 Mal-Chr7 89191812 89200920 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2720 K10590 - gmx:100783336 2886.29