Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2579 ATGGAAAGTGATTCTTTTGTAATTGCCAATGGAAATGGCAATGACAACTCACATCCGAATTCGCAGAGGACTTACCAAGCAGTAGTCATTGCAACCCGAGATATGGGTATTTCTATGGATGGAAAATTACCCTGGACATTGCCTACTGATCAAAAGTTTTTTGACGATATCACAACGATAACATCTGATCCTGGGAAGAAGAACGCTGTTGTCATGGGTAGAAAATCATGGGAGGCTATCCCTCCTGAGGACAGGCCTCTCAGTGGCCGTCTTAATGTTATTCTAACTCGCTCGGGTAGTTTTGATACTCCAACTGCAGAGAATGTTCTTATATGTGGAAGTGTATCTTCTGCTATGGAACTGTTGGCTTCTTCTCCTTACTGTCAGTCAATTGAGAAAGTATTTCTTACCGGAGGTGGTGAGATATTTAGAGAGGCTCTTCATGCACCTGGATGTGAAGCTATCCATATTACAGAAATTGAAGCAAGCATTGAGTGCGACACTTTTATGCCTCGAATTGATTTCTCTGTATTTCATCCGTGGTATTCGTCTTTCCCTTTGGTGGAAAATGGCATCCGCTATTCTTTTAACACTTATATTATTTTTGAGAGGCATGAGGAGTACAAATATCTTAGATTAGTTGAAGAAATCATTTCTGAAGGCACAGTTAAGGATGATAGGACGGGGACTGGTACCTTGTCCAAATTTGGTTCCAAGATGAGATTTAATCTGCGTAGAAGCTTTCCACTTTTAACAACCAAGAGAGTATTTTGGCGAGGGGTTGTTGAAGAGCTTCTTTGGTTTATCAGTGGCTCAACAAGTGCCAAGGTGCTGCAGGAAAAAGGCATTCATATATGGGATGGCAATGCATCCAGGGAATACCTTGATAGCATTGGGTTGAAAGAAAGGGAAGAGGGTGACTTAGGACCTGTTTATGGGTTTCAGTGGAGGCATTTTGGTGCAAGGTATACTAACATGCATGATGACTACTCCGGCCAAGGATTTGATCAGCTTTTAGATGTTATTAACAAGATAAAACACAATCCTGATGATCGACGTATCATCCTCTCAGCATGGAATCCATCTGATCTTAAATTAATGGCACTTCCGCCCTGCCACATGTTTGCGCAGTTCTATGTGGCAAATGGAGAGTTATCATGTCAAATGTATCAACGATCTGCTGACATGGGCCTGGGTGTGCCATTTAATATTGCATCTTATGCGCTCTTGACATACATGATTGCTCATGTTTGTGATCTTGTTCCAGGTGATTTTATCCATGTTATTGGGGATGCACATGTTTACCGCAATCATGTGAAGCCTTTGCAGGAGCAGCTCCAAAACTTACCAAAACCTTTTCCGATTTTGAAGATAAATCCAAAGAAGAAAGATATAGATTCTTTTGTGGCTGCTGATTTCAAGCTCATAGGCTATGATCCTCACCAGAAGATAGAAATGAAGATGGCTGTTTAG 1473 0.4134 MESDSFVIANGNGNDNSHPNSQRTYQAVVIATRDMGISMDGKLPWTLPTDQKFFDDITTITSDPGKKNAVVMGRKSWEAIPPEDRPLSGRLNVILTRSGSFDTPTAENVLICGSVSSAMELLASSPYCQSIEKVFLTGGGEIFREALHAPGCEAIHITEIEASIECDTFMPRIDFSVFHPWYSSFPLVENGIRYSFNTYIIFERHEEYKYLRLVEEIISEGTVKDDRTGTGTLSKFGSKMRFNLRRSFPLLTTKRVFWRGVVEELLWFISGSTSAKVLQEKGIHIWDGNASREYLDSIGLKEREEGDLGPVYGFQWRHFGARYTNMHDDYSGQGFDQLLDVINKIKHNPDDRRIILSAWNPSDLKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTYMIAHVCDLVPGDFIHVIGDAHVYRNHVKPLQEQLQNLPKPFPILKINPKKKDIDSFVAADFKLIGYDPHQKIEMKMAV* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2579 490 SUPERFAMILY Thymidylate synthase/dCMP hydroxymethylase 187 490 IPR036926 -
Mal7g2579 490 PANTHER BIFUNCTIONAL DIHYDROFOLATE REDUCTASE-THYMIDYLATE SYNTHASE 1 200 - -
Mal7g2579 490 Hamap Thymidylate synthase [thyA]. 207 490 IPR000398 GO:0004799|GO:0006231
Mal7g2579 490 PANTHER BIFUNCTIONAL DIHYDROFOLATE REDUCTASE-THYMIDYLATE SYNTHASE 200 490 - -
Mal7g2579 490 CDD DHFR 27 200 IPR001796 GO:0004146|GO:0046654
Mal7g2579 490 Gene3D Thymidylate synthase/dCMP hydroxymethylase domain 201 490 IPR036926 -
Mal7g2579 490 ProSitePatterns Thymidylate synthase active site. 352 380 IPR020940 GO:0004799|GO:0006231
Mal7g2579 490 TIGRFAM thym_sym: thymidylate synthase 209 490 IPR000398 GO:0004799|GO:0006231
Mal7g2579 490 PANTHER THYMIDYLATE SYNTHASE 1 1 200 IPR045097 GO:0016741
Mal7g2579 490 MobiDBLite consensus disorder prediction 1 21 - -
Mal7g2579 490 PANTHER THYMIDYLATE SYNTHASE 1 200 490 IPR045097 GO:0016741
Mal7g2579 490 ProSiteProfiles Dihydrofolate reductase (DHFR) domain profile. 24 201 IPR001796 GO:0004146|GO:0046654
Mal7g2579 490 Pfam Dihydrofolate reductase 27 199 IPR001796 GO:0004146|GO:0046654
Mal7g2579 490 Gene3D Dihydrofolate Reductase, subunit A 5 200 IPR024072 -
Mal7g2579 490 CDD TS_Pyrimidine_HMase 210 443 IPR023451 -
Mal7g2579 490 PIRSF DHFR-TS 10 201 IPR012262 GO:0004146|GO:0004799|GO:0006730
Mal7g2579 490 PIRSF DHFR-TS 198 490 IPR012262 GO:0004146|GO:0004799|GO:0006730
Mal7g2579 490 SUPERFAMILY Dihydrofolate reductase-like 24 199 IPR024072 -
Mal7g2579 490 Pfam Thymidylate synthase 209 490 IPR023451 -
Mal7g2579 490 PRINTS Thymidylate synthase family signature 367 382 IPR000398 GO:0004799|GO:0006231
Mal7g2579 490 PRINTS Thymidylate synthase family signature 248 269 IPR000398 GO:0004799|GO:0006231
Mal7g2579 490 PRINTS Thymidylate synthase family signature 423 440 IPR000398 GO:0004799|GO:0006231
Mal7g2579 490 PRINTS Thymidylate synthase family signature 341 360 IPR000398 GO:0004799|GO:0006231
Mal7g2579 490 PRINTS Thymidylate synthase family signature 385 411 IPR000398 GO:0004799|GO:0006231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2579 Mal-Chr7 87464402 87467744 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2579 K13998 - gmx:100786311 885.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2579 7 87464402 87467744 Mal7g2579 7 87464402 87467744 ECH