Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2562 ATGGTGTCTACTTGTGTGAACTTTAAGGCCAATACCCATATAGCAAATTTGAGGAAAGACAATATTTTTCATCAAGATAATGGTTTTCTTGGTGAGAGAATCAAAGAGGGTGTGAATCAGTTGGGAATAAGTTTGAGAACCAAGGAGAGGGTTAAGAAGGCCAAACCTGGTGTTGTGTCTGCTGTTCTTACATCTAATGATGCCACTGAGACTAAGACTTTTCAGGTTCCATCATTTATGAGAAGAAAAGCTGACCCTAAAAATGTTGTTTCCATCATATTGGGGGGAGGTCCCGGTGTTCAACTTTTTCCTCTTACCAAAAGAGCTGCTACACCTGCTGTGCCTGTTGGTGGGTGCTATAGGCTTATCGACATTCCGATGAGCAACTGCATCAACAGTGGCATCAACAAAATATTTGTACTGACACAGTTCAATTCTGCATCTTTAAACCGTCATATCGCTCGCACCTATTTTGGAAATGGAATCAACTTTGGAGATGGATATGTGGAGGTTTTGGCGGCTACTCAAACGCCAGGAGAAGCTGGCAAAAATTGGTTTCAAGGAACAGCAGATGCTGTGAGGCAATTTACATGGGTATTTGAGGATGCCAAGAACACTAACATTGAGAATGTAATAATCTTGGCTGGTGATCATCTATACAGAATGGATTACATGGACCTTGTGCAGAGCCACATTGATAGAAATGCAGATATTACGGTATCATGTGCTGCTGTTGGTGACAGTCGTGCAGCGGATTACGGATTAGTCAAGGTAGATAGCAGAGGTCGCATCATCCAATTTTCGGAAAAACCTAAGGGAGCTGATCTTAAATCAATGCAAGCAGACACCTCTCTTTTTGGATTGTCAAACCAAGATGCATTAAGGTCACCGTATATTGCATCTATGGGAGTTTATGTATTCAAGACTGATGTTTTACTCAAACTTCTGAAATGGAGGTATCCCACATCCAATGACTTTGGATCTGAAATCATCCCTGCATCTGTTAAGGAATGCAATGTCCAAGCCTTCTTTTTCGGAGACTATTGGGAAGACATTGGAACAATAAAATCATTTTACGACGCCAACATGGCTCTTACTGAAGAGAGTCCAATGTTCAAATTTTATGATCCCAAGACACCTATTTTCACATCTCCTGGATTCTTACCACCAACGAAGATTGATAAATGCAGGATTGTGGATGCAATAATCTCACACGGTTGTTTCCTGAGAGAATGTAGTGTACAACATTCCATTGTGGGTGAACGCTCACGTTTGGATTACGGCGTTGAGCTCCAGGACACTGTAATGATGGGAGCAGATTATTACCAAACCGAATCCGAAATTGCTTCTGAGCTGGCAGAGGGAAAGGTTCCTATTGGGATTGGAAGTAACAGCAAAATCAGGAAATGTATAATTGACAAGAATGCCAGGATTGGGAAAGATGTCATCATCATGAACAAAGATGGTGTTCAAGAAGCAGATAGACCAGAAAATGGATTTTACATCCGATCAGGAATCACAATCGTAATGGAGAAGGCAACAATAGAAGACGGCACTGTCATATAA 1566 0.4132 MVSTCVNFKANTHIANLRKDNIFHQDNGFLGERIKEGVNQLGISLRTKERVKKAKPGVVSAVLTSNDATETKTFQVPSFMRRKADPKNVVSIILGGGPGVQLFPLTKRAATPAVPVGGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGINFGDGYVEVLAATQTPGEAGKNWFQGTADAVRQFTWVFEDAKNTNIENVIILAGDHLYRMDYMDLVQSHIDRNADITVSCAAVGDSRAADYGLVKVDSRGRIIQFSEKPKGADLKSMQADTSLFGLSNQDALRSPYIASMGVYVFKTDVLLKLLKWRYPTSNDFGSEIIPASVKECNVQAFFFGDYWEDIGTIKSFYDANMALTEESPMFKFYDPKTPIFTSPGFLPPTKIDKCRIVDAIISHGCFLRECSVQHSIVGERSRLDYGVELQDTVMMGADYYQTESEIASELAEGKVPIGIGSNSKIRKCIIDKNARIGKDVIIMNKDGVQEADRPENGFYIRSGITIVMEKATIEDGTVI* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2562 521 SUPERFAMILY Trimeric LpxA-like enzymes 384 521 IPR011004 -
Mal7g2562 521 Gene3D Hexapeptide repeat proteins 387 521 - -
Mal7g2562 521 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 1 521 IPR011831 GO:0005978|GO:0008878
Mal7g2562 521 Pfam Nucleotidyl transferase 91 367 IPR005835 GO:0009058|GO:0016779
Mal7g2562 521 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 3, CHLOROPLASTIC 1 521 - -
Mal7g2562 521 CDD LbH_G1P_AT_C 389 515 - -
Mal7g2562 521 SUPERFAMILY Nucleotide-diphospho-sugar transferases 87 482 IPR029044 -
Mal7g2562 521 TIGRFAM glgC: glucose-1-phosphate adenylyltransferase 89 485 IPR011831 GO:0005978|GO:0008878
Mal7g2562 521 CDD ADP_Glucose_PP 92 352 - -
Mal7g2562 521 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 300 310 IPR005836 GO:0005978|GO:0008878
Mal7g2562 521 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 185 193 IPR005836 GO:0005978|GO:0008878
Mal7g2562 521 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 74 386 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2562 Mal-Chr7 87276111 87280046 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2562 K00975 - gmx:100808791 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2562 7 87276111 87280046 Mal7g2562 7 87276111 87280046 ECH