Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2559 ATGGGAAAAGCCAAAGCTAAAGGAAAACACCGTTTAGACAAATACTACCACTTAGCCAAAGAACACGGTTACCGTTCTCGTGCATCATGGAAACTCGTTCAAATCAATTCCAAATTCCATTTCCTCGAATCCTCACGCTCCGTCCTCGATCTCTGCGCCGCTCCTGGTGGTTGGATGCAAGTCGCTGTTCAACGTGTTCCCGTCGATCATCTCGTTATCGGCGTTGATCTTGCTCCGATTAAACCGATTCGCGGCGCGATTGCTATTCAGGAGGATATTACTAGACCTGAGTGTAAGTCTAGAGTTAGGAAAATTATGAATGAAAATGGTTACCGTGCTTTTGATGTTATTCTTCATGATGGTTCGCCCAATGTTGGTGGTGCTTGGGCTCAAGAAGCGACCAGTCAGAATTCTCTTGTTATTGATTCTATTAAGCTTGCTACTCAGTTTTTAGCACCTAAGGGAACTTTTGTTACCAAGGTTTTCAGGTCGCAGGATTACAATTCTGTTGTGTGGTGTATGAAGAAGTTGTTTGAGAAGGTTGAGGTGGAAAAACCCCCAGCTAGTCGTTCTGAATCTGCTGAGATATATCTTTTGGGGATTAAGTATTTGGCTCCTGCTAAGATTGATCCTCGCATTCTCGATATCAAACATCTTTTTGAGGCATCTGCTCAACCGATACCTAAGATGGTGGATGTACTTGGAGATAATAAGCAAAAGCGGCATCGTGACGGGTATGAAGATGGAAACACAACTTTGAGGAAGGTGTTTTCAGCTGCAAATTTTGTTTGGGCAGATGCTCCTCTGGATATTCTTGGTTCAGTTACTTCCATAAGCTTCACTGATCCAGCTGATATACCTATCAAGGATCACGACCTAACAACTGAAGAGGTAAAATCTCTATGTGAAGATTTGAGAGTTTTGGGGAAGCAAGACTTCAAGCATCTTATAAAGTGGCGGACTAACATTAGAAAAGCTCTATCACCTGCTAAAAAGGCCGAACCTGCTACTACAGCTGAGGTGGAAAATGAGGTAGATGAAGATGATAGAATACTCAACGAAATGGAGGAACTGACAAATGCAATGGACCGCAAGAAGAAACGTGAAAAAAAGATTTTAGCAAAAAGAAGAGCCAAGGATAAGGCACGGAAAGCAACAGGGATGCAAATGGATGCAGTAGAAGATGGTTATGTTGATCATGAGTTGTTTTCCCTTGCCTCTATGAAGGGTAAGAAGGATCTGGTAGCTGTTGACACCACTGACTATGAAGGTGGTGAGGGTGAAGTGGATGACAGCGAGAATGAAGAAAACAAAGTTGGCCCGGAGCATTCATCTAGTGACTTAGATTCTGATGAAGAACGTAAAAGATATGATGAACAAATGGAAGATTTACTTGAACAAGCTTATGAGCGGTTTGTGGTAAAAAAGGAAGGGCCTGCAAAGCAGCGTAAGCGTATTAAGAAATCCTATGATGCAGACTCCCAACTTTTGGAGGCTGGTGAAGATGATGACATTGTTCCATCCAAATATGATTCAGATGAAGATCAGGATGTTCAAGAAGCAAATCCTTTGATGGTGCCACTTACTGATGGTACAGGGCCCACCCAAGAGGAGATCACAAATATGTGGTTTAGTCAGGATGTCTTTGCTGAAGCTGTTGAGGAAGGAGGCTTTGAGAAGGATGACAGTGAAAATGAAATGGATATTGATGGGCTGAAGGAGAAGACAGCTGTTGCTGAAAAGATCAAAGAAAATAAGCCTGTTGCTGAGAAAATCAAAGAAAATAAGCCTGTTGCTGAAAAGATTAAAGAAAATAAAACGGCTGCTTCTGTGGAGATAGATCGCACTCAATCTCAAGCATCCAATGAAATGGATTTTGAGATTGTTCCTGCACCTGCTACTGATTCCGATGATTCGTCCTCTGATGAGTCAGATGACGATGTTGAAAAAAAAGCTGAGATATTGGCTTATGCTAAGAAGATGCTGAGGAAAAAGCAAAGGGAACAGATGCTAGATGATGCATATAATAAGTACATGTTTGATGACCAGGGATTGCCTAAGTGGTTTCTCGATGAGGAAAGGAAACACCGTGTACCAGTTAAGCCTGTCACGAAAGAGGAAGTTGCCGCAATGAAAGCACACTTTAAAGAAATTGATACTCGGCCTGCAAAGAAGGTGGCTGAGGCCAAAGCACGAAAGAAGCGTATTGCAATGAGGAAGATTGAGAAAGTACGCAAGAAGGCCAATGCTATATCAGATCAGCCAGACATATCTGATCGTTCCAAGAGTAAACAAATTGACCGACTATATAAAAATGCTGTTCCGAAAAGGCCTCAAAAGGAGTATGTAGTTGCGAAGAAAGGTGTCCAGGTTAGGACTGGCAAAGGAAAAGTCCTTGTTGATCGCAGGATGAAGAGTGACGCAAGGAAAAGTGGAACGGGTAAGGCAGGCAAAAGAGGTTCCAAGGCCAAGGGTGGCAAGGCTCCAAAGGGTGGCAAGGCACCAAAGGGAGGCAAGGCGCCAAAGGGTGGCAGGGCTCCGAATGGTAAGGCTCCTATGGGCAAAGGATCTTCAAAGTCCTCTGCCAAGAAGGGAAGGAAATAA 2604 0.4328 MGKAKAKGKHRLDKYYHLAKEHGYRSRASWKLVQINSKFHFLESSRSVLDLCAAPGGWMQVAVQRVPVDHLVIGVDLAPIKPIRGAIAIQEDITRPECKSRVRKIMNENGYRAFDVILHDGSPNVGGAWAQEATSQNSLVIDSIKLATQFLAPKGTFVTKVFRSQDYNSVVWCMKKLFEKVEVEKPPASRSESAEIYLLGIKYLAPAKIDPRILDIKHLFEASAQPIPKMVDVLGDNKQKRHRDGYEDGNTTLRKVFSAANFVWADAPLDILGSVTSISFTDPADIPIKDHDLTTEEVKSLCEDLRVLGKQDFKHLIKWRTNIRKALSPAKKAEPATTAEVENEVDEDDRILNEMEELTNAMDRKKKREKKILAKRRAKDKARKATGMQMDAVEDGYVDHELFSLASMKGKKDLVAVDTTDYEGGEGEVDDSENEENKVGPEHSSSDLDSDEERKRYDEQMEDLLEQAYERFVVKKEGPAKQRKRIKKSYDADSQLLEAGEDDDIVPSKYDSDEDQDVQEANPLMVPLTDGTGPTQEEITNMWFSQDVFAEAVEEGGFEKDDSENEMDIDGLKEKTAVAEKIKENKPVAEKIKENKPVAEKIKENKTAASVEIDRTQSQASNEMDFEIVPAPATDSDDSSSDESDDDVEKKAEILAYAKKMLRKKQREQMLDDAYNKYMFDDQGLPKWFLDEERKHRVPVKPVTKEEVAAMKAHFKEIDTRPAKKVAEAKARKKRIAMRKIEKVRKKANAISDQPDISDRSKSKQIDRLYKNAVPKRPQKEYVVAKKGVQVRTGKGKVLVDRRMKSDARKSGTGKAGKRGSKAKGGKAPKGGKAPKGGKAPKGGRAPNGKAPMGKGSSKSSAKKGRK* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2559 867 PANTHER RRNA METHYLTRANSFERASE-RELATED 5 821 - -
Mal7g2559 867 Coils Coil 338 375 - -
Mal7g2559 867 MobiDBLite consensus disorder prediction 477 495 - -
Mal7g2559 867 Pfam FtsJ-like methyltransferase 24 200 IPR002877 GO:0008168|GO:0032259
Mal7g2559 867 MobiDBLite consensus disorder prediction 744 783 - -
Mal7g2559 867 MobiDBLite consensus disorder prediction 434 458 - -
Mal7g2559 867 MobiDBLite consensus disorder prediction 502 516 - -
Mal7g2559 867 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 23 203 IPR029063 -
Mal7g2559 867 MobiDBLite consensus disorder prediction 422 458 - -
Mal7g2559 867 Gene3D Vaccinia Virus protein VP39 21 209 IPR029063 -
Mal7g2559 867 Hamap AdoMet-dependent rRNA methyltransferase <gene_name> [SPB1]. 1 818 IPR028589 GO:0008649|GO:0031167
Mal7g2559 867 MobiDBLite consensus disorder prediction 362 387 - -
Mal7g2559 867 MobiDBLite consensus disorder prediction 477 518 - -
Mal7g2559 867 MobiDBLite consensus disorder prediction 744 867 - -
Mal7g2559 867 PANTHER RIBOSOMAL RNA METHYLTRANSFERASE 5 821 - -
Mal7g2559 867 Coils Coil 599 619 - -
Mal7g2559 867 MobiDBLite consensus disorder prediction 796 814 - -
Mal7g2559 867 Pfam Spb1 C-terminal domain 621 811 IPR012920 GO:0005634|GO:0006364|GO:0008168
Mal7g2559 867 Pfam Domain of unknown function (DUF3381) 237 383 IPR024576 -
Mal7g2559 867 MobiDBLite consensus disorder prediction 368 382 - -
Mal7g2559 867 MobiDBLite consensus disorder prediction 606 649 - -
Mal7g2559 867 Hamap Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 204 IPR015507 GO:0001510|GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2559 Mal-Chr7 87252209 87258215 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2559 K14857 - gmx:100790741 1192.95