Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2527 ATGGTATCTCAAGCTTTATCAGTTCCTGCAACTCCCACTTTCACAATCGCTTCTCACAGGAGAATCTCTTCTCAACTTGCGTTTTCTCACAGAACTCACTGTGTTGCAGCTTCTTCCTTGCCTAGCCCCTATAGTTATTCATCCGGGTTATCAAGTAAAACCCGCGGTTTTCGTTTAAAACTTGATGAGAAAAATGCTCGTGATGTTAGTACAAGTTACGGTGTAATTGAAGCCAAGAAGGGGAACCCACCAATAACACCGGCCATCATGACTCCTGGAGGAGCACTTGATCTCTCATCTGTTTTGTTCAGGAATCGTGTAATATTCATAGGACAGCCAGTAAACGCACAAGTGGCTCAGAGAATTATATCGCAGCTTGTGACTCTGGCTACTATTGATCCAGATGCAGATATACTGATGTATATAAATTGCCCTGGTGGAAGCACTTATTCAGTGCTTGCAGTTTATGATTGCATGTCTTGGATAAAGCCAAAGGTTGGTACAGTATGTTTTGGAGTAGCTGCAAGCCAAGGAACACTTCTCCTTGCAGGTGGGGAAAAGGGAATGCGCTATTCAATGCCAAATGCTCGCATTATGATGAATCAACCACAGTGTGGATTTGGGGGTAATGTTGAGGATGTGAGACCTCTAGTGAATGAAGCTGTTCAATCCCGTCAGAAAATGGAGAAGATGTTCAGTGCTTTCACCGGACAGACATTAGAGAAGGTGCAAGAGTACACAGAGAGGGACACTTTTCTATCTGTTTCTGAGGCTTTGGAGTTTGGTCTTATTGATGGTGTCCTGGAAACAGAGTATTGA 819 0.4359 MVSQALSVPATPTFTIASHRRISSQLAFSHRTHCVAASSLPSPYSYSSGLSSKTRGFRLKLDEKNARDVSTSYGVIEAKKGNPPITPAIMTPGGALDLSSVLFRNRVIFIGQPVNAQVAQRIISQLVTLATIDPDADILMYINCPGGSTYSVLAVYDCMSWIKPKVGTVCFGVAASQGTLLLAGGEKGMRYSMPNARIMMNQPQCGFGGNVEDVRPLVNEAVQSRQKMEKMFSAFTGQTLEKVQEYTERDTFLSVSEALEFGLIDGVLETEY* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2527 272 Hamap ATP-dependent Clp protease proteolytic subunit [clpP]. 85 271 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal7g2527 272 CDD S14_ClpP_2 97 267 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal7g2527 272 PRINTS Clp protease catalytic subunit P signature 137 157 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal7g2527 272 PRINTS Clp protease catalytic subunit P signature 97 112 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal7g2527 272 PRINTS Clp protease catalytic subunit P signature 189 208 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal7g2527 272 PRINTS Clp protease catalytic subunit P signature 246 265 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal7g2527 272 PRINTS Clp protease catalytic subunit P signature 168 185 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal7g2527 272 Pfam Clp protease 96 270 IPR023562 -
Mal7g2527 272 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 15 272 IPR023562 -
Mal7g2527 272 SUPERFAMILY ClpP/crotonase 96 270 IPR029045 -
Mal7g2527 272 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 6, CHLOROPLASTIC 15 272 - -
Mal7g2527 272 Gene3D - 95 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2527 Mal-Chr7 86631318 86636168 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2527 K01358 - gmx:100799710 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2527 7 86631318 86636168 Mal7g2527 7 86631318 86636168 ECH