Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2495 ATGAGGTCTCTAATAGTGAGAGATGCAGTTGTATACCGTGACCATGTTCAAGCAATAAAATCTGGTTTTGCATCAAGCATTTTCACTTGTAATCAACTTATTCACCTTTATTCCAAACATGGTCTTTTAAAAGATGCCCACAAACTGTTCGATGAAATTCCCCACCCAAATGTATACTCTTGGAATGCCCTTATTATGGCTTACATAAAAGCACGCAGCTTGACACAAGCACGATCGATTTTTGACTCGGCCTCTTATAAAGATTTGGTTTCTTATAATTCCATGTTGTCAGCTTATGTTGGTGCTGATGGGTACGAGACTCATGCGCTTGATTTGTTTAATAGAATGCAATCAGCACGTGATATGATTGGGGTTGACGAGTTCACTCTCACGACAATGGTTAACTTTACTGCGAAGTTACGTGTAGCATGTTATGGGAAGCAGATGCATTCGTATATGGTGAAAACTGCAAGTGATTTAAGCAAGTTTGCGTCGAGTTCTCTTATTAACATGTACTCTAAGTGTAGTTTGTTTCGTGAAGCTTGCAATGTGGTTAGTGGTTTTGATGGGGTGGTGGACTTGGTTTCGAAGAATGCGATGGTTGCTGCTTGTTGTAGGGAAGGAAAAATGGACATGGCGCTGAATGTCTTTTGGAAAAATCATGAATTGAATGATACTGTGTCTTGGAATACGTTGATTGCAGGATATTCCCAGAATGGCTATATGGATAAAGCACTTGACTTGTTTGTTGAGATGACTGAAAGAGGTGTTAGGTATGATGAACATACTTTAGCAAGTGTTTTAAGTGTCTGCTCTGGCCTAAAATGTTTGAAACTTGGCAAGTGTGTCCATGCGTGGGTGTTGAAAAATGATTTCAGTTCGAATCCATTCATTAGCAGCGGCATCGTAGACTTATACTGTAAATGTGGGGATATTAGGTATGCGGAATCAGTGTATGCAGGAATTGGGATTAAAAACCAATTTGCAGTTTGCTCATTGATTGTAGGCTATTCATCTCAAGGCGAGTTGATGAAAGCCCAAAGGCTTTTTGATTCTCTATCGGAAAGAAACTCTGTTGTTTGGACAGCTCTGTGTTCTGGTTATGCCAAATCGCAACAGTGTGAGGAAGTCTTCAAACTTTTCAGAGAGTTTATAACTAGAGAAGCGCTAACTCCTGATGCAATGATCATTATCAGTGTGCTTGGTGCCTGCGCGACACAAGCTACCCTTTGTTTGGGAAAGCAGATTCATACTTACATTTTGAGAATGAGACTTAAGATGGATAAAAAATTGTTGAGTGCTATGGTTGATATGTACTCAAAATGTGGTAATATTATGTACGCCGAGAAAAGCTTCCAACTCATGACTGATGAGTATAGAGATGCGATCTTATATAATGTCATGATAGCTGGTTATGCTCATCATGGTTTTGAAAATAAAGCTATTCAGCTTTTTCAGGACATGTTGAAGAAAAATGTCAAGCCAGATGCAGTCACTTTTGTAGCACTTCTATCTGCTTGTCGGCACCGTGGACTAGTAGAACAAGGAGAGAAATTTTTCATTTCTATGGAAGAAGATTACAATGTATTGCCCGAGATAAACCACTATGCATGTATGGTTGATATGTATGGAAGGGCTAATCAACTAGAAAAGGCAGTAGAGTTCATGAGGAAGATTCCCATACAGATAGATGGTACAATTTGGGGAGCATTTCTTAATGCTTGTCAGATAAACAACAATACATCACTTGTCAACATAGCAGAAGAGGAACTATTAAAAATTGGGGCAGATAATGGGTCTCGGTATGTGCAATTGGCCAATGTCTATGCTGCTGAGGGGAAATGGGATGAGATGGGAAGAATAAGGAAGAAAATGAAAGTGAAGGAGGCTAAAAAGCTTACTGGTTGCAGTTGGATATATGTGGAAAATGGTATTCATGCATTTACTTCTGGTGATAAATCTCATGCAAAAGCAGATGCAATATATTCAACTTTGTCGTGCTTGAATGAGAGAGAACTGAAGCAACTTCATGAAATCTGGGAGTGA 2046 0.3925 MRSLIVRDAVVYRDHVQAIKSGFASSIFTCNQLIHLYSKHGLLKDAHKLFDEIPHPNVYSWNALIMAYIKARSLTQARSIFDSASYKDLVSYNSMLSAYVGADGYETHALDLFNRMQSARDMIGVDEFTLTTMVNFTAKLRVACYGKQMHSYMVKTASDLSKFASSSLINMYSKCSLFREACNVVSGFDGVVDLVSKNAMVAACCREGKMDMALNVFWKNHELNDTVSWNTLIAGYSQNGYMDKALDLFVEMTERGVRYDEHTLASVLSVCSGLKCLKLGKCVHAWVLKNDFSSNPFISSGIVDLYCKCGDIRYAESVYAGIGIKNQFAVCSLIVGYSSQGELMKAQRLFDSLSERNSVVWTALCSGYAKSQQCEEVFKLFREFITREALTPDAMIIISVLGACATQATLCLGKQIHTYILRMRLKMDKKLLSAMVDMYSKCGNIMYAEKSFQLMTDEYRDAILYNVMIAGYAHHGFENKAIQLFQDMLKKNVKPDAVTFVALLSACRHRGLVEQGEKFFISMEEDYNVLPEINHYACMVDMYGRANQLEKAVEFMRKIPIQIDGTIWGAFLNACQINNNTSLVNIAEEELLKIGADNGSRYVQLANVYAAEGKWDEMGRIRKKMKVKEAKKLTGCSWIYVENGIHAFTSGDKSHAKADAIYSTLSCLNERELKQLHEIWE* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2495 681 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 26 60 IPR002885 -
Mal7g2495 681 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 357 392 IPR002885 -
Mal7g2495 681 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 461 495 IPR002885 -
Mal7g2495 681 PANTHER - 330 672 - -
Mal7g2495 681 TIGRFAM PPR: pentatricopeptide repeat domain 464 497 IPR002885 -
Mal7g2495 681 TIGRFAM PPR: pentatricopeptide repeat domain 227 260 IPR002885 -
Mal7g2495 681 TIGRFAM PPR: pentatricopeptide repeat domain 28 53 IPR002885 -
Mal7g2495 681 PANTHER - 15 218 - -
Mal7g2495 681 PANTHER - 194 352 - -
Mal7g2495 681 Pfam PPR repeat family 461 507 IPR002885 -
Mal7g2495 681 Pfam PPR repeat family 225 271 IPR002885 -
Mal7g2495 681 PANTHER - 330 672 - -
Mal7g2495 681 Gene3D Tetratricopeptide repeat domain 143 276 IPR011990 GO:0005515
Mal7g2495 681 Gene3D Tetratricopeptide repeat domain 14 142 IPR011990 GO:0005515
Mal7g2495 681 Gene3D Tetratricopeptide repeat domain 277 415 IPR011990 GO:0005515
Mal7g2495 681 Gene3D Tetratricopeptide repeat domain 416 513 IPR011990 GO:0005515
Mal7g2495 681 Pfam E motif 579 639 IPR046848 -
Mal7g2495 681 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 88 119 IPR002885 -
Mal7g2495 681 Pfam PPR repeat 28 53 IPR002885 -
Mal7g2495 681 Pfam PPR repeat 331 357 IPR002885 -
Mal7g2495 681 Pfam PPR repeat 59 82 IPR002885 -
Mal7g2495 681 Pfam PPR repeat 90 118 IPR002885 -
Mal7g2495 681 Pfam PPR repeat 196 217 IPR002885 -
Mal7g2495 681 Pfam PPR repeat 536 558 IPR002885 -
Mal7g2495 681 Pfam PPR repeat 359 385 IPR002885 -
Mal7g2495 681 Gene3D Tetratricopeptide repeat domain 514 663 IPR011990 GO:0005515
Mal7g2495 681 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 225 259 IPR002885 -
Mal7g2495 681 PANTHER - 15 218 - -
Mal7g2495 681 PANTHER - 194 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2495 Mal-Chr7 85822579 85824624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2495 63 665 Glycoside Hydrolase AT3G49170 32.343 5.24e-97 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2495 - - gmx:100803987 1085.09